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The map label for this gene is yvgT

Identifier: 16080399

GI number: 16080399

Start: 3436849

End: 3437457

Strand: Reverse

Name: yvgT

Synonym: BSU33460

Alternate gene names: 16080399

Gene position: 3437457-3436849 (Counterclockwise)

Preceding gene: 16080400

Following gene: 16080398

Centisome position: 81.54

GC content: 50.9

Gene sequence:

>609_bases
ATGGCTTGGGAGCTGCTTAGTGTGATTGGCATCATTGCGTTTGCAGTCAGCGGCGCAATTGTTGCGATGGAAGAGGAATA
TGATATTTTAGGAGTTTATATATTAGGGATTGTCACAGCTTTTGGAGGAGGAGCGATCCGCAATTTGCTGATCGGTGTTC
CGGTGTCAGCGCTATGGGAGCAGGGAGCGTACTTTCAAATCGCGCTTTTATCTATTACAATTGTGTTTCTGTTTCCGAAG
CTGCTGCTGAAGCATTGGAATAAGTGGGGCAATTTATCAGATGCGATCGGCCTCGCTGCCTTTGCTATCCAAGGCGCACT
GTATGCCGTCAAAATGGGCCATCCGCTTAGTGCCGTGATCGTGGCTGCGGTGCTGACGGGAAGCGGGGGCGGGATCATCC
GCGACCTTCTTGCCGGGCGCAAACCGCTTGTGCTGAAAGCGGAAATCTATGCGGTATGGGCGGCGCTCGGCGGTTTAATC
GTCGGCTTGGGCTGGCTGGGGAACTCGTTCGGCTTATACGTTCTGTTTTTCGTGCTCGTTGTTTGCCGGGTTTGTTCCTA
TATGTTTAATTGGAAGCTGCCAAACCGTTCTTTTCGCTTAGATAATTAA

Upstream 100 bases:

>100_bases
TCTTTTTTTCTCATGAAAATGTTATTGATTTTACGCTGGAGCGATTATAAAATCTAGAGGTCGTCAGAAAATTTAACAAA
CATAAAAGGGAGTCATCAGA

Downstream 100 bases:

>100_bases
TAGCAAAAAAACCGATTTCGAAGTGAAATCGGTTTTTTTCTGCATAATATAAATAACCCAAACCTTGATTGGTATTGGGT
GAATGTGCTATTATAAATTG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MAWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLLIGVPVSALWEQGAYFQIALLSITIVFLFPK
LLLKHWNKWGNLSDAIGLAAFAIQGALYAVKMGHPLSAVIVAAVLTGSGGGIIRDLLAGRKPLVLKAEIYAVWAALGGLI
VGLGWLGNSFGLYVLFFVLVVCRVCSYMFNWKLPNRSFRLDN

Sequences:

>Translated_202_residues
MAWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLLIGVPVSALWEQGAYFQIALLSITIVFLFPK
LLLKHWNKWGNLSDAIGLAAFAIQGALYAVKMGHPLSAVIVAAVLTGSGGGIIRDLLAGRKPLVLKAEIYAVWAALGGLI
VGLGWLGNSFGLYVLFFVLVVCRVCSYMFNWKLPNRSFRLDN
>Mature_201_residues
AWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLLIGVPVSALWEQGAYFQIALLSITIVFLFPKL
LLKHWNKWGNLSDAIGLAAFAIQGALYAVKMGHPLSAVIVAAVLTGSGGGIIRDLLAGRKPLVLKAEIYAVWAALGGLIV
GLGWLGNSFGLYVLFFVLVVCRVCSYMFNWKLPNRSFRLDN

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family

Homologues:

Organism=Escherichia coli, GI87082304, Length=152, Percent_Identity=35.5263157894737, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786352, Length=206, Percent_Identity=32.5242718446602, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVGT_BACSU (O32216)

Other databases:

- EMBL:   AL009126
- PIR:   A70041
- RefSeq:   NP_391226.1
- ProteinModelPortal:   O32216
- EnsemblBacteria:   EBBACT00000001957
- GeneID:   936011
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33460
- NMPDR:   fig|224308.1.peg.3352
- GenoList:   BSU33460
- GeneTree:   EBGT00050000001869
- HOGENOM:   HBG610998
- OMA:   WELLSVI
- ProtClustDB:   CLSK873106
- BioCyc:   BSUB:BSU33460-MONOMER
- InterPro:   IPR005115

Pfam domain/function: PF03458 UPF0126

EC number: NA

Molecular weight: Translated: 21716; Mature: 21585

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x124386a8)-; HASH(0x1258a3c0)-; HASH(0x11d718d4)-; HASH(0x1252a1e0)-; HASH(0x121897d0)-; HASH(0x124145ac)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLLIGVPVSALWE
CHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHC
QGAYFQIALLSITIVFLFPKLLLKHWNKWGNLSDAIGLAAFAIQGALYAVKMGHPLSAVI
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHH
VAAVLTGSGGGIIRDLLAGRKPLVLKAEIYAVWAALGGLIVGLGWLGNSFGLYVLFFVLV
HHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VCRVCSYMFNWKLPNRSFRLDN
HHHHHHHHHCCCCCCCCCCCCH
>Mature Secondary Structure 
AWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLLIGVPVSALWE
HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHC
QGAYFQIALLSITIVFLFPKLLLKHWNKWGNLSDAIGLAAFAIQGALYAVKMGHPLSAVI
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHH
VAAVLTGSGGGIIRDLLAGRKPLVLKAEIYAVWAALGGLIVGLGWLGNSFGLYVLFFVLV
HHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VCRVCSYMFNWKLPNRSFRLDN
HHHHHHHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377