Click here to switch to the map view.

The map label for this gene is yuzF

Identifier: 16080233

GI number: 16080233

Start: 3264265

End: 3264501

Strand: Reverse

Name: yuzF

Synonym: BSU31820

Alternate gene names: 16080233

Gene position: 3264501-3264265 (Counterclockwise)

Preceding gene: 16080234

Following gene: 16080231

Centisome position: 77.44

GC content: 44.73

Gene sequence:

>237_bases
ATGGTCAACCAAGGTAGTCCGCAACTGGTCTCTTTAGTCGATCCTTATGTCTATCAGACCATTAAAAAGCTCATCGGCTC
AAGGTTCGTTATACAGACAGTACGAGATACGGTCAGAGGCAGACTGATCGATGTAAAACCTGACCATATCACAATTGAAG
GAGCCCGAAATTCTGTTTGTTTGATCAGAATCCAGCACATGATTTCCGTCACCCCAGATTACAGTGAGCGGGTCTAA

Upstream 100 bases:

>100_bases
TCCTAAAATCTCCGCACCCCTTTGTTTTATCAGGTAAGCCTGTGTCATTATCCATAAGCGCGGCATAAGCTGAGATAAAA
CACACAAAGGGGATAAAAGT

Downstream 100 bases:

>100_bases
CAGTGCTTGCGCATGAAAAATAGGCGTACAACAGGACGTCCTATTTTTCAGTTAAGCGCTGTAAAAACGCACTATGATAC
ATTGTTCCATCAAGGTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MVNQGSPQLVSLVDPYVYQTIKKLIGSRFVIQTVRDTVRGRLIDVKPDHITIEGARNSVCLIRIQHMISVTPDYSERV

Sequences:

>Translated_78_residues
MVNQGSPQLVSLVDPYVYQTIKKLIGSRFVIQTVRDTVRGRLIDVKPDHITIEGARNSVCLIRIQHMISVTPDYSERV
>Mature_78_residues
MVNQGSPQLVSLVDPYVYQTIKKLIGSRFVIQTVRDTVRGRLIDVKPDHITIEGARNSVCLIRIQHMISVTPDYSERV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUZF_BACSU (O32097)

Other databases:

- EMBL:   AL009126
- PIR:   E70026
- RefSeq:   NP_391060.1
- EnsemblBacteria:   EBBACT00000002262
- GeneID:   936562
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31820
- NMPDR:   fig|224308.1.peg.3185
- GenoList:   BSU31820
- GeneTree:   EBGT00050000005901
- HOGENOM:   HBG313524
- OMA:   DVKPDHL
- ProtClustDB:   CLSK873263
- BioCyc:   BSUB:BSU31820-MONOMER
- InterPro:   IPR020139
- ProDom:   PD058323

Pfam domain/function: PF10842 DUF2642

EC number: NA

Molecular weight: Translated: 8866; Mature: 8866

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNQGSPQLVSLVDPYVYQTIKKLIGSRFVIQTVRDTVRGRLIDVKPDHITIEGARNSVC
CCCCCCCCHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEE
LIRIQHMISVTPDYSERV
EEEEEEHHCCCCCCCCCC
>Mature Secondary Structure
MVNQGSPQLVSLVDPYVYQTIKKLIGSRFVIQTVRDTVRGRLIDVKPDHITIEGARNSVC
CCCCCCCCHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEE
LIRIQHMISVTPDYSERV
EEEEEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377