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The map label for this gene is yubF

Identifier: 16080163

GI number: 16080163

Start: 3190462

End: 3190725

Strand: Reverse

Name: yubF

Synonym: BSU31110

Alternate gene names: 16080163

Gene position: 3190725-3190462 (Counterclockwise)

Preceding gene: 16080164

Following gene: 16080158

Centisome position: 75.69

GC content: 37.5

Gene sequence:

>264_bases
GTGCAGAAATATAGACGCAGAAACACGGTTGCCTTTACAGTACTAGCTTATTTTACTTTTTTTGCGGGAGTATTTTTGTT
TAGTATCGGACTCTATAATGCTGATAATCTGGAACTCAATGAAAAAGGTTATTACATCGCTGTTATGATACTTGTAGCAG
TTGGTGCGATTCTTACGCAAAAAGTGACCCGTGATAACGCGGAGGATAACGAAATCATCGCGGAACAGGAAAAAAGACAA
AATCAATCTCATATCGAATCATAA

Upstream 100 bases:

>100_bases
TACTGGTATTTTTAATTCTTTGTTCCATTCCGGGGAATTTGAGGTATAATATTCCACGGAAGTTATCACTTTTTAACTAT
GCTTTCGGGAGGGAACAAAG

Downstream 100 bases:

>100_bases
AAAATCCGGCGACTGCACGCCGGATTTTTTTGATATCACCCTGTAAACACTTCGCCATCAGGATAACGGATATTTGATTG
CTCTGTTTTTGCGAATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MQKYRRRNTVAFTVLAYFTFFAGVFLFSIGLYNADNLELNEKGYYIAVMILVAVGAILTQKVTRDNAEDNEIIAEQEKRQ
NQSHIES

Sequences:

>Translated_87_residues
MQKYRRRNTVAFTVLAYFTFFAGVFLFSIGLYNADNLELNEKGYYIAVMILVAVGAILTQKVTRDNAEDNEIIAEQEKRQ
NQSHIES
>Mature_87_residues
MQKYRRRNTVAFTVLAYFTFFAGVFLFSIGLYNADNLELNEKGYYIAVMILVAVGAILTQKVTRDNAEDNEIIAEQEKRQ
NQSHIES

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUBF_BACSU (O32082)

Other databases:

- EMBL:   AL009126
- PIR:   A70007
- RefSeq:   NP_390989.1
- EnsemblBacteria:   EBBACT00000002586
- GeneID:   937150
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31110
- NMPDR:   fig|224308.1.peg.3114
- GenoList:   BSU31110
- GeneTree:   EBGT00050000004769
- HOGENOM:   HBG349019
- OMA:   NAEDNEI
- ProtClustDB:   CLSK887780
- BioCyc:   BSUB:BSU31110-MONOMER
- InterPro:   IPR008024

Pfam domain/function: PF05360 YiaAB

EC number: NA

Molecular weight: Translated: 10012; Mature: 10012

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11e61c2c)-; HASH(0x11b08ed8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKYRRRNTVAFTVLAYFTFFAGVFLFSIGLYNADNLELNEKGYYIAVMILVAVGAILTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
KVTRDNAEDNEIIAEQEKRQNQSHIES
HHHCCCCCCCHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MQKYRRRNTVAFTVLAYFTFFAGVFLFSIGLYNADNLELNEKGYYIAVMILVAVGAILTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
KVTRDNAEDNEIIAEQEKRQNQSHIES
HHHCCCCCCCHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377