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The map label for this gene is glgA

Identifier: 16080147

GI number: 16080147

Start: 3166118

End: 3167572

Strand: Reverse

Name: glgA

Synonym: BSU30950

Alternate gene names: 16080147

Gene position: 3167572-3166118 (Counterclockwise)

Preceding gene: 16080148

Following gene: 16080146

Centisome position: 75.14

GC content: 45.77

Gene sequence:

>1455_bases
TTGAAGATATTATTTGCTGTGTCAGAATGCACCCCATTTGTGAAATCAGGAGGTCTTGCCGATGTAGCAGGTGCTCTGCC
AAAGGCGCTTGCGCGATTAGGCAATGAGGTAGCTGTGATGCTGCCGAAGTACAGCCAAATACCTGAACCGTGGAAAAAGC
GTATGAAAAAACAGGCTGAGTGTACCGTAGCTGTCGGCTGGCGGCAGCAATATTGCGGAATTGAACATATGGCAGAGAAT
GATGTGAATTATTACTTCATCGACAATGAGTACTATTTCAACAGGGATTCGTTGTACGGGCATTATGATGACGGTGAGCG
GTTTGCCTTTTTTTCAAGAGCTGTGCTGGAGGCTGCCAAAGTTGTGAATGTTCAAGCCGATATTGTTCATACTCACGATT
GGCATACAGCGATGGTCAATTATTTGCTGAAAGAGGAGTACAGAAAACATCCTTTTTATGAACGGATGAAAAGCGTGCTC
ACGATCCACAACCTGCAGTTTCAAGGCATATTCCCTCCTGATGTCACACATGACTTGCTGGGTCTTGAGATGGATCATTT
TCATTATGAAAGGTTAGAATGCAACGGATTTGTTAATTTTATGAAAGCGGGCATCATTGCGGCTGATCATGTGACAACTG
TGAGCCCCACTTACAGAAATGAAATCATGACGCCGTATTATGGTGAGCAGTTGGAACAGGTTTTGCAATATAGGGAAGAT
GATGTAACCGGCATATTAAATGGCATTGATGATACGTTCTATCAGCCGAAAAGCGACCCTTATATAGAGGCGCAATACGA
TTCAGGGGATCTTGCATGCAAGCTGGAAAACAAAACGAAGCTTCAGCAGCGGATGGGGCTTCCAGAGAAAAACGATATTC
CGCTGATCAGTATGGTGACAAGGCTCACTAAACAAAAGGGGCTTGATCTTGTCCGCAGAATTATGCACGAACTTCTTGAG
GAGCAAGACATACAGCTGGTTGTGCTAGGCACAGGAGAACGTGAATTTGAAGATTATTTCCGGTATGCAGAATTTGCTTT
TCATGAGAAGTGCCGGGCTTATATCGGGTTTGATGAGCCGCTAGCCCATCAAATTTATGCGGGCTCTGATATGTTTTTGA
TGCCGTCGAAATTTGAGCCGTGCGGTTTGGGGCAGCTCATTGCTCTTCAATATGGCGCCATTCCGATTGTCAGGGAAACG
GGCGGTCTTTACGACACTGTCCGTGCCTATCAGGAGGAAGAGGGAACGGGCAATGGCTTTACGTTTTCCGCCTTTAATGC
GCATGATCTGAAATTTACGATAGAAAGGGCGCTGTCGTTTTATTGCCAACAGGATGTATGGAAGAGCATCGTGAAGACCG
CTATGAATGCAGATTACAGCTGGGGGAAGTCGGCTAAAGAGTATCAGCGTATTTTCGAGCAGGTGACAAGGAGTGGACGG
GATGTTCTCGAGTAA

Upstream 100 bases:

>100_bases
ATAAGGATGTTAAAATCGGCAAGGCGACGGAAGCTGCAGGAACAGCTGAGCAGCCGCTTGTATTAAGAAAAGGTTTGGTG
CAAGGAGAGCTGATGAATTC

Downstream 100 bases:

>100_bases
AGAACGCTTTGCAGACTTATTTTTAAAGCGTCTGGAAATGACGTGCGGAAAAAGCTTTAAAGATTCTGCCAAGCTGGATC
AATATAAAACGTTGGGCAAT

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAECTVAVGWRQQYCGIEHMAEN
DVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAKVVNVQADIVHTHDWHTAMVNYLLKEEYRKHPFYERMKSVL
TIHNLQFQGIFPPDVTHDLLGLEMDHFHYERLECNGFVNFMKAGIIAADHVTTVSPTYRNEIMTPYYGEQLEQVLQYRED
DVTGILNGIDDTFYQPKSDPYIEAQYDSGDLACKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLE
EQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRET
GGLYDTVRAYQEEEGTGNGFTFSAFNAHDLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGR
DVLE

Sequences:

>Translated_484_residues
MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAECTVAVGWRQQYCGIEHMAEN
DVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAKVVNVQADIVHTHDWHTAMVNYLLKEEYRKHPFYERMKSVL
TIHNLQFQGIFPPDVTHDLLGLEMDHFHYERLECNGFVNFMKAGIIAADHVTTVSPTYRNEIMTPYYGEQLEQVLQYRED
DVTGILNGIDDTFYQPKSDPYIEAQYDSGDLACKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLE
EQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRET
GGLYDTVRAYQEEEGTGNGFTFSAFNAHDLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGR
DVLE
>Mature_484_residues
MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAECTVAVGWRQQYCGIEHMAEN
DVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAKVVNVQADIVHTHDWHTAMVNYLLKEEYRKHPFYERMKSVL
TIHNLQFQGIFPPDVTHDLLGLEMDHFHYERLECNGFVNFMKAGIIAADHVTTVSPTYRNEIMTPYYGEQLEQVLQYRED
DVTGILNGIDDTFYQPKSDPYIEAQYDSGDLACKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLE
EQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRET
GGLYDTVRAYQEEEGTGNGFTFSAFNAHDLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGR
DVLE

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=491, Percent_Identity=36.8635437881874, Blast_Score=301, Evalue=5e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_BACSU (P39125)

Other databases:

- EMBL:   Z25795
- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   S40051
- RefSeq:   NP_390973.1
- ProteinModelPortal:   P39125
- SMR:   P39125
- EnsemblBacteria:   EBBACT00000001770
- GeneID:   936781
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30950
- NMPDR:   fig|224308.1.peg.3098
- GenoList:   BSU30950
- GeneTree:   EBGT00050000003331
- HOGENOM:   HBG596384
- OMA:   IYLVGHP
- PhylomeDB:   P39125
- ProtClustDB:   PRK00654
- BioCyc:   BSUB:BSU30950-MONOMER
- BRENDA:   2.4.1.21
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 55858; Mature: 55858

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAE
CEEEEEEHHCCHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCC
CTVAVGWRQQYCGIEHMAENDVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAK
EEEEECCHHHHCCHHHHHCCCCEEEEECCEEEECCCCCCEECCCCCHHHHHHHHHHHHHH
VVNVQADIVHTHDWHTAMVNYLLKEEYRKHPFYERMKSVLTIHNLQFQGIFPPDVTHDLL
HHEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEECCCCCCCCHHHHH
GLEMDHFHYERLECNGFVNFMKAGIIAADHVTTVSPTYRNEIMTPYYGEQLEQVLQYRED
CCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEECCCHHHHCCCCCHHHHHHHHHHHHCCC
DVTGILNGIDDTFYQPKSDPYIEAQYDSGDLACKLENKTKLQQRMGLPEKNDIPLISMVT
CHHHHHHCCHHHCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHH
RLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEP
HHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGF
HHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCE
TFSAFNAHDLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH
DVLE
HCCC
>Mature Secondary Structure
MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAE
CEEEEEEHHCCHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCC
CTVAVGWRQQYCGIEHMAENDVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAK
EEEEECCHHHHCCHHHHHCCCCEEEEECCEEEECCCCCCEECCCCCHHHHHHHHHHHHHH
VVNVQADIVHTHDWHTAMVNYLLKEEYRKHPFYERMKSVLTIHNLQFQGIFPPDVTHDLL
HHEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEECCCCCCCCHHHHH
GLEMDHFHYERLECNGFVNFMKAGIIAADHVTTVSPTYRNEIMTPYYGEQLEQVLQYRED
CCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEECCCHHHHCCCCCHHHHHHHHHHHHCCC
DVTGILNGIDDTFYQPKSDPYIEAQYDSGDLACKLENKTKLQQRMGLPEKNDIPLISMVT
CHHHHHHCCHHHCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHH
RLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEP
HHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGF
HHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCE
TFSAFNAHDLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH
DVLE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8145641; 9387221; 9384377