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The map label for this gene is rpmE2

Identifier: 16080122

GI number: 16080122

Start: 3138978

End: 3139226

Strand: Reverse

Name: rpmE2

Synonym: BSU30700

Alternate gene names: 16080122

Gene position: 3139226-3138978 (Counterclockwise)

Preceding gene: 16080126

Following gene: 16080121

Centisome position: 74.47

GC content: 41.77

Gene sequence:

>249_bases
ATGAAAGAAGGAATTCATCCAAAGAACCACAAAGTGATATTTCAGGATGTCAACAGCGGCTACCGTTTTCTAAGCACCTC
TACGAAAACATCTAATGAAACAGCAGAGTGGGAGGACGGAAACACATATCCTGTCATTAAAGTAGAGGTAAGCTCTGACA
CGCATCCGTTTTATACAGGCCGCCAGAAATTCAATGAAAAAGGCGGACGAGTTGAGCAGTTCAAAAAACGCTATAACATG
GGGAAATAA

Upstream 100 bases:

>100_bases
ACGATGTGAAACAGAGGGAAGGATATAAGAAGATTGACAAAACGTTTGTAAGGTTATAAAATAAAACGTAATTATTACGA
TTTATTGAAAGGAGATACCC

Downstream 100 bases:

>100_bases
GGCAGGCCTGAGGGTTTGTCTTTTTTTATTATGACGAATAAACAAGGGTTGTGATATATTGAAGAGTAAAAAGAATAGAA
AGGGACAACGAACATGAGTC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEVSSDTHPFYTGRQKFNEKGGRVEQFKKRYNM
GK

Sequences:

>Translated_82_residues
MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEVSSDTHPFYTGRQKFNEKGGRVEQFKKRYNM
GK
>Mature_82_residues
MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEVSSDTHPFYTGRQKFNEKGGRVEQFKKRYNM
GK

Specific function: While neither of the L31 paralogs is essential, this protein does not seem to function as the main L31 protein. Has a higher affinity for 70S ribosomes than the zinc-containing L31 paralog; is able to displace it to varying extents, even under zinc-replet

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_BACSU (O34967)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   E69993
- RefSeq:   NP_390948.1
- ProteinModelPortal:   O34967
- SMR:   O34967
- EnsemblBacteria:   EBBACT00000000707
- GeneID:   937208
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30700
- NMPDR:   fig|224308.1.peg.3073
- GenoList:   BSU30700
- GeneTree:   EBGT00050000002228
- HOGENOM:   HBG610087
- OMA:   YRTVLFH
- PhylomeDB:   O34967
- ProtClustDB:   PRK01678
- BioCyc:   BSUB:BSU30700-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9531; Mature: 9531

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEVSSDTHPFYTG
CCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
RQKFNEKGGRVEQFKKRYNMGK
HHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEVSSDTHPFYTG
CCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
RQKFNEKGGRVEQFKKRYNMGK
HHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377