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The map label for this gene is ytpB

Identifier: 16080102

GI number: 16080102

Start: 3121538

End: 3122641

Strand: Reverse

Name: ytpB

Synonym: BSU30500

Alternate gene names: 16080102

Gene position: 3122641-3121538 (Counterclockwise)

Preceding gene: 16080103

Following gene: 16080099

Centisome position: 74.07

GC content: 43.93

Gene sequence:

>1104_bases
TTGACAGTACCGGAACATCCTTTTGGATTGATGGCAAAGGTATATCGAGATATTTTTCCGCTCGTTCATCAAGAGCTGGA
CATATGGAAGCAAAAATCAGAATCGATTCATAACAGTGAATTGAAAGCACAGGCAACCGCAAGTATTCGGGACAAAACGT
TTCACTGTGAAGGCGGCGGCATACTGGCCTTATTGTCAGGCAGCCAAAAGCAGAAATGTGTCGAGTTTATCATCGCGTAT
CAAACGATTAGTGATTATTTGGACAATCTGTGTGACCGCAGCACCTCGCTGGACCCGCAGGATTTTCGGATGCTCCATGC
CTCAATGCAGGACGCACTGACAGTTGGGGCGGAACTGCAAAACTATTATCAATTCAGGGAAGAACAGGATGACAGCGGAT
ATTTGCATGAACTGGTTAAAACGTGCCAGCGTGTTCTCGGCTCCATTGAGCACTATGACATGATTAAACCTTATCTGCTT
GAACTGTGCGGCTATTATTGCGATTTGCAGGTGCATAAGCACGTTATTGAGCATGAGCGTGTTCCGCGGCTTGAAAAGTG
GTTTACTCAATATGAATCAGAGCTGCCTGAGATGGAATGGTATGAATTTTCAGCCTGTGCAGGCTCAACGTTAGGCATTT
TCTGTCTGGTTGCGTATTCGTTCCAGCCTGATTTCACAGAAAGCACCGCTAAAAAAATCCGAGACAGTTATTTTCCTTAC
ATACAGGGTCTTCATATTCTTCTTGATTATTTGATTGATCAAGAGGAGGACTTGCTGGAAGGAGACTTGAATTTCTGCTC
GTATTATCAGTCTCATGAAGAGATGATGGACCGGCTTGAACACTTTATCCATAAAGCCGACGAGCATTTACAAGGCATTC
CGCATGAAAACTTCCATCGTTTAATCAATCGCGGCTTGCTTGGCGTTTATTTGTCAGATGATAAAGTGGCAGGCCAAAAG
GAAATGGGCCGGCTCGCAAAGAAGCTGATCAAAGCCAGCGGAAAAACCTCCCTTTTCTTTTATATCAACGGCAGAGCCTA
CCGGAAATTTCAAAAAATGTCCTGGATGAAAAATTCAAAGAAAAAAGCTCAAATCATTTGCTGA

Upstream 100 bases:

>100_bases
TTTACCATGAGATCTTCAATGAACCCGAGAGAGAAGATGTTTTTAAAGCAGCAAGAGCGTTTACTGATCAATATATTTGA
ACTAGTAGGGGGTGCATGTG

Downstream 100 bases:

>100_bases
TCTGAGCTTTTTTTTCGATGGCGACAATAAATGGCGGGTCATTTTGCTGATTGATAAACCCGTATGTTAATACACGGGCT
GTTTGCTGGTCCAAGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTVPEHPFGLMAKVYRDIFPLVHQELDIWKQKSESIHNSELKAQATASIRDKTFHCEGGGILALLSGSQKQKCVEFIIAY
QTISDYLDNLCDRSTSLDPQDFRMLHASMQDALTVGAELQNYYQFREEQDDSGYLHELVKTCQRVLGSIEHYDMIKPYLL
ELCGYYCDLQVHKHVIEHERVPRLEKWFTQYESELPEMEWYEFSACAGSTLGIFCLVAYSFQPDFTESTAKKIRDSYFPY
IQGLHILLDYLIDQEEDLLEGDLNFCSYYQSHEEMMDRLEHFIHKADEHLQGIPHENFHRLINRGLLGVYLSDDKVAGQK
EMGRLAKKLIKASGKTSLFFYINGRAYRKFQKMSWMKNSKKKAQIIC

Sequences:

>Translated_367_residues
MTVPEHPFGLMAKVYRDIFPLVHQELDIWKQKSESIHNSELKAQATASIRDKTFHCEGGGILALLSGSQKQKCVEFIIAY
QTISDYLDNLCDRSTSLDPQDFRMLHASMQDALTVGAELQNYYQFREEQDDSGYLHELVKTCQRVLGSIEHYDMIKPYLL
ELCGYYCDLQVHKHVIEHERVPRLEKWFTQYESELPEMEWYEFSACAGSTLGIFCLVAYSFQPDFTESTAKKIRDSYFPY
IQGLHILLDYLIDQEEDLLEGDLNFCSYYQSHEEMMDRLEHFIHKADEHLQGIPHENFHRLINRGLLGVYLSDDKVAGQK
EMGRLAKKLIKASGKTSLFFYINGRAYRKFQKMSWMKNSKKKAQIIC
>Mature_366_residues
TVPEHPFGLMAKVYRDIFPLVHQELDIWKQKSESIHNSELKAQATASIRDKTFHCEGGGILALLSGSQKQKCVEFIIAYQ
TISDYLDNLCDRSTSLDPQDFRMLHASMQDALTVGAELQNYYQFREEQDDSGYLHELVKTCQRVLGSIEHYDMIKPYLLE
LCGYYCDLQVHKHVIEHERVPRLEKWFTQYESELPEMEWYEFSACAGSTLGIFCLVAYSFQPDFTESTAKKIRDSYFPYI
QGLHILLDYLIDQEEDLLEGDLNFCSYYQSHEEMMDRLEHFIHKADEHLQGIPHENFHRLINRGLLGVYLSDDKVAGQKE
MGRLAKKLIKASGKTSLFFYINGRAYRKFQKMSWMKNSKKKAQIIC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTPB_BACSU (O34707)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   E69998
- RefSeq:   NP_390928.1
- EnsemblBacteria:   EBBACT00000002558
- GeneID:   936222
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30500
- NMPDR:   fig|224308.1.peg.3053
- GenoList:   BSU30500
- GeneTree:   EBGT00050000002764
- HOGENOM:   HBG314007
- OMA:   YLIDQEE
- ProtClustDB:   CLSK873568
- BioCyc:   BSUB:BSU30500-MONOMER
- InterPro:   IPR019712

Pfam domain/function: PF10776 DUF2600

EC number: NA

Molecular weight: Translated: 42843; Mature: 42712

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPEHPFGLMAKVYRDIFPLVHQELDIWKQKSESIHNSELKAQATASIRDKTFHCEGGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
ILALLSGSQKQKCVEFIIAYQTISDYLDNLCDRSTSLDPQDFRMLHASMQDALTVGAELQ
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NYYQFREEQDDSGYLHELVKTCQRVLGSIEHYDMIKPYLLELCGYYCDLQVHKHVIEHER
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPRLEKWFTQYESELPEMEWYEFSACAGSTLGIFCLVAYSFQPDFTESTAKKIRDSYFPY
CCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQGLHILLDYLIDQEEDLLEGDLNFCSYYQSHEEMMDRLEHFIHKADEHLQGIPHENFHR
HHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LINRGLLGVYLSDDKVAGQKEMGRLAKKLIKASGKTSLFFYINGRAYRKFQKMSWMKNSK
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCC
KKAQIIC
CCCCCCC
>Mature Secondary Structure 
TVPEHPFGLMAKVYRDIFPLVHQELDIWKQKSESIHNSELKAQATASIRDKTFHCEGGG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
ILALLSGSQKQKCVEFIIAYQTISDYLDNLCDRSTSLDPQDFRMLHASMQDALTVGAELQ
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NYYQFREEQDDSGYLHELVKTCQRVLGSIEHYDMIKPYLLELCGYYCDLQVHKHVIEHER
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPRLEKWFTQYESELPEMEWYEFSACAGSTLGIFCLVAYSFQPDFTESTAKKIRDSYFPY
CCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQGLHILLDYLIDQEEDLLEGDLNFCSYYQSHEEMMDRLEHFIHKADEHLQGIPHENFHR
HHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LINRGLLGVYLSDDKVAGQKEMGRLAKKLIKASGKTSLFFYINGRAYRKFQKMSWMKNSK
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCC
KKAQIIC
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377