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The map label for this gene is yttB

Identifier: 16080087

GI number: 16080087

Start: 3107232

End: 3108425

Strand: Reverse

Name: yttB

Synonym: BSU30350

Alternate gene names: 16080087

Gene position: 3108425-3107232 (Counterclockwise)

Preceding gene: 16080089

Following gene: 255767696

Centisome position: 73.74

GC content: 45.23

Gene sequence:

>1194_bases
ATGCCGCGTGCTCTTAAAATTTTAGTCATTGGAATGTTTATCAATGTGACGGGTGCTTCTTTTTTATGGCCGCTGAATAC
GATTTATATCCATAATCATTTAGGAAAGTCGTTAACAGTAGCCGGACTTGTCCTGATGCTGAATTCCGGCGCCAGTGTGG
CTGGCAATTTATGCGGAGGTTTTTTGTTTGATAAAATCGGCGGTTTTAAATCGATTATGCTTGGGATAGCCATTACGTTA
GCAAGCCTGATGGGTCTTGTCTTTTTTCATGATTGGCCAGCCTATATTGTGCTGCTGACGATTGTGGGCTTTGGCTCCGG
TGTTGTTTTTCCGGCAAGCTACGCAATGGCGGGATCGGTATGGCCTGAAGGGGGAAGGAAGGCATTTAATGCGATATATG
TCGCGCAAAACGCGGGCGTGGCCGTTGGTTCAGCGCTTGGCGGTGTCGTGGCATCTTTCTCGTTTTCATATGTATTTTTG
GCAAATGCCGTATTGTATCTGATCTTTTTCTTTATTGTATATTTCGGATTTCGAAATATTCAAACGGGCGATGCATCCCA
AACATCCGTGCTTGATTATGATGCTGTGAACAGCAAAGCAAAATTTGCCGCACTGATCATTTTAAGCGGAGGCTATGTAC
TCGGATGGCTGGCTTATTCTCAGTGGTCAACCACAATTGCTTCGTACACACAAAGCATTGGAATATCTCTTTCCTTATAC
AGCGTGCTGTGGACGGTTAACGGAATTCTCATTGTGCTCGGCCAGCCGCTCGTCAGTTTTGTGGTGAAAAAATGGGCCGA
GTCGCTAAAAGCGCAAATGGTCATCGGCTTTATCATTTTTATTGTGTCTTTCAGCATGCTGCTGACTGCAAAGCAATTTC
CGATGTTTCTCGCTGCGATGGTGATCCTGACTATCGGAGAAATGCTTGTTTGGCCTGCTGTGCCGACTATTGCCAATCAG
CTTGCCCCTAAAGGGAAAGAAGGCTTTTATCAAGGCTTTGTCAACAGTGCGGCGACAGGCGGCAGAATGATTGGTCCCCT
GTTCGGAGGAGTGCTTGTCGATCATTACGGCATTAGGGCTCTTGTTTTATCTCTGTTGGTATTGCTGCTGATCAGTATTG
CCACAACGCTTCTATATGACAAACGGATAAAATCAGCTAAAGAAACAAATAAGCAGGCATCAATCTCTTCATAA

Upstream 100 bases:

>100_bases
GACAGATAGAATGAATGTGCTATGATAACTGGATTCGTACGGAGCCGTTTTAGGTTTCGTTTTTTTCATGAGCTTTTTTA
GGTAAGAAAGGGGGATGAGT

Downstream 100 bases:

>100_bases
TAAAAGATCCCGCCGAATGAGCGGGATCTTTCAGCGTGTCGACAAACCCTCGCATTCGTTGTCAGGCCTGCGCTTCGGTG
CTCACGAATTAGAACATTCG

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MPRALKILVIGMFINVTGASFLWPLNTIYIHNHLGKSLTVAGLVLMLNSGASVAGNLCGGFLFDKIGGFKSIMLGIAITL
ASLMGLVFFHDWPAYIVLLTIVGFGSGVVFPASYAMAGSVWPEGGRKAFNAIYVAQNAGVAVGSALGGVVASFSFSYVFL
ANAVLYLIFFFIVYFGFRNIQTGDASQTSVLDYDAVNSKAKFAALIILSGGYVLGWLAYSQWSTTIASYTQSIGISLSLY
SVLWTVNGILIVLGQPLVSFVVKKWAESLKAQMVIGFIIFIVSFSMLLTAKQFPMFLAAMVILTIGEMLVWPAVPTIANQ
LAPKGKEGFYQGFVNSAATGGRMIGPLFGGVLVDHYGIRALVLSLLVLLLISIATTLLYDKRIKSAKETNKQASISS

Sequences:

>Translated_397_residues
MPRALKILVIGMFINVTGASFLWPLNTIYIHNHLGKSLTVAGLVLMLNSGASVAGNLCGGFLFDKIGGFKSIMLGIAITL
ASLMGLVFFHDWPAYIVLLTIVGFGSGVVFPASYAMAGSVWPEGGRKAFNAIYVAQNAGVAVGSALGGVVASFSFSYVFL
ANAVLYLIFFFIVYFGFRNIQTGDASQTSVLDYDAVNSKAKFAALIILSGGYVLGWLAYSQWSTTIASYTQSIGISLSLY
SVLWTVNGILIVLGQPLVSFVVKKWAESLKAQMVIGFIIFIVSFSMLLTAKQFPMFLAAMVILTIGEMLVWPAVPTIANQ
LAPKGKEGFYQGFVNSAATGGRMIGPLFGGVLVDHYGIRALVLSLLVLLLISIATTLLYDKRIKSAKETNKQASISS
>Mature_396_residues
PRALKILVIGMFINVTGASFLWPLNTIYIHNHLGKSLTVAGLVLMLNSGASVAGNLCGGFLFDKIGGFKSIMLGIAITLA
SLMGLVFFHDWPAYIVLLTIVGFGSGVVFPASYAMAGSVWPEGGRKAFNAIYVAQNAGVAVGSALGGVVASFSFSYVFLA
NAVLYLIFFFIVYFGFRNIQTGDASQTSVLDYDAVNSKAKFAALIILSGGYVLGWLAYSQWSTTIASYTQSIGISLSLYS
VLWTVNGILIVLGQPLVSFVVKKWAESLKAQMVIGFIIFIVSFSMLLTAKQFPMFLAAMVILTIGEMLVWPAVPTIANQL
APKGKEGFYQGFVNSAATGGRMIGPLFGGVLVDHYGIRALVLSLLVLLLISIATTLLYDKRIKSAKETNKQASISS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTTB_BACSU (O34546)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   F70001
- RefSeq:   NP_390913.1
- ProteinModelPortal:   O34546
- EnsemblBacteria:   EBBACT00000003836
- GeneID:   936526
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30350
- NMPDR:   fig|224308.1.peg.3038
- GenoList:   BSU30350
- GeneTree:   EBGT00070000031785
- HOGENOM:   HBG338244
- OMA:   INISMSQ
- ProtClustDB:   CLSK873566
- BioCyc:   BSUB:BSU30350-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 42452; Mature: 42321

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11898108)-; HASH(0xf22569c)-; HASH(0x11371104)-; HASH(0x11d4b67c)-; HASH(0xfa15954)-; HASH(0x11a33330)-; HASH(0x11c05310)-; HASH(0x10d812f8)-; HASH(0x11ab3e24)-; HASH(0x1068f0c0)-; HASH(0x11490054)-; HASH(0x1015375c)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRALKILVIGMFINVTGASFLWPLNTIYIHNHLGKSLTVAGLVLMLNSGASVAGNLCGG
CCCHHEEHHHHHHHHHCCCHHCCCCCEEEEEHHCCCHHHHHHHHHHHCCCCCHHHHHHHH
FLFDKIGGFKSIMLGIAITLASLMGLVFFHDWPAYIVLLTIVGFGSGVVFPASYAMAGSV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
WPEGGRKAFNAIYVAQNAGVAVGSALGGVVASFSFSYVFLANAVLYLIFFFIVYFGFRNI
CCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QTGDASQTSVLDYDAVNSKAKFAALIILSGGYVLGWLAYSQWSTTIASYTQSIGISLSLY
CCCCCCCCEEEEHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SVLWTVNGILIVLGQPLVSFVVKKWAESLKAQMVIGFIIFIVSFSMLLTAKQFPMFLAAM
HHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILTIGEMLVWPAVPTIANQLAPKGKEGFYQGFVNSAATGGRMIGPLFGGVLVDHYGIRA
HHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHH
LVLSLLVLLLISIATTLLYDKRIKSAKETNKQASISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure 
PRALKILVIGMFINVTGASFLWPLNTIYIHNHLGKSLTVAGLVLMLNSGASVAGNLCGG
CCHHEEHHHHHHHHHCCCHHCCCCCEEEEEHHCCCHHHHHHHHHHHCCCCCHHHHHHHH
FLFDKIGGFKSIMLGIAITLASLMGLVFFHDWPAYIVLLTIVGFGSGVVFPASYAMAGSV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
WPEGGRKAFNAIYVAQNAGVAVGSALGGVVASFSFSYVFLANAVLYLIFFFIVYFGFRNI
CCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QTGDASQTSVLDYDAVNSKAKFAALIILSGGYVLGWLAYSQWSTTIASYTQSIGISLSLY
CCCCCCCCEEEEHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SVLWTVNGILIVLGQPLVSFVVKKWAESLKAQMVIGFIIFIVSFSMLLTAKQFPMFLAAM
HHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILTIGEMLVWPAVPTIANQLAPKGKEGFYQGFVNSAATGGRMIGPLFGGVLVDHYGIRA
HHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHH
LVLSLLVLLLISIATTLLYDKRIKSAKETNKQASISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377