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The map label for this gene is ytnI

Identifier: 16079984

GI number: 16079984

Start: 3003049

End: 3003330

Strand: Reverse

Name: ytnI

Synonym: BSU29320

Alternate gene names: 16079984

Gene position: 3003330-3003049 (Counterclockwise)

Preceding gene: 16079985

Following gene: 16079983

Centisome position: 71.24

GC content: 41.49

Gene sequence:

>282_bases
ATGAGTGATGTTGTGAACATTGTGGTTTGGAGTAAAAAAGGCTGTTCGTATTGTGAGGAAGTCAAGAATTATTTGAATGA
AAAAGGGTTCCCGTTCCAAAATATCGATGTTTCAGAGAAAGAAAAGCTTCGGGATATTTTACAGGTGAAATATGGGGTGC
GCCATGTGCCTGTGGTCGAAATCGGGCGCGGCAATCAGTATCAAGGGATAACTGAAATCGGCATTGAACACCTTGATCTT
GCACTTGCTAATCATGCACAGATAAAGGAGGCAAAAAGATGA

Upstream 100 bases:

>100_bases
TTATTTTTACACCGATCAAAAATGCTGTAGAAAAACAGCTGTCTTATCAGCTGCTGAGCGATGCAGTTTTAGCTGCAAAA
CGTTAAGGAGGGACAGAAGA

Downstream 100 bases:

>100_bases
CACGTGCAGATTTTATTCAGTTTGGAGCCATGATTCACGGTGTCGGGGGAACAACTGACGGCTGGCGTCATCCCGATGTT
GATCCCTCGGCCAGCACGAA

Product: redoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSDVVNIVVWSKKGCSYCEEVKNYLNEKGFPFQNIDVSEKEKLRDILQVKYGVRHVPVVEIGRGNQYQGITEIGIEHLDL
ALANHAQIKEAKR

Sequences:

>Translated_93_residues
MSDVVNIVVWSKKGCSYCEEVKNYLNEKGFPFQNIDVSEKEKLRDILQVKYGVRHVPVVEIGRGNQYQGITEIGIEHLDL
ALANHAQIKEAKR
>Mature_92_residues
SDVVNIVVWSKKGCSYCEEVKNYLNEKGFPFQNIDVSEKEKLRDILQVKYGVRHVPVVEIGRGNQYQGITEIGIEHLDLA
LANHAQIKEAKR

Specific function: Unknown

COG id: COG0695

COG function: function code O; Glutaredoxin and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTNI_BACSU (O34639)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   D69997
- RefSeq:   NP_390810.1
- HSSP:   Q5PSJ1
- ProteinModelPortal:   O34639
- SMR:   O34639
- EnsemblBacteria:   EBBACT00000002659
- GeneID:   936632
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29320
- NMPDR:   fig|224308.1.peg.2935
- GenoList:   BSU29320
- GeneTree:   EBGT00050000001826
- HOGENOM:   HBG338318
- OMA:   YGIRHVP
- ProtClustDB:   CLSK887712
- BioCyc:   BSUB:BSU29320-MONOMER
- GO:   GO:0006810
- InterPro:   IPR002109
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10

Pfam domain/function: PF00462 Glutaredoxin; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 10628; Mature: 10497

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00195 GLUTAREDOXIN_1; PS51354 GLUTAREDOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVVNIVVWSKKGCSYCEEVKNYLNEKGFPFQNIDVSEKEKLRDILQVKYGVRHVPVVE
CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
IGRGNQYQGITEIGIEHLDLALANHAQIKEAKR
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDVVNIVVWSKKGCSYCEEVKNYLNEKGFPFQNIDVSEKEKLRDILQVKYGVRHVPVVE
CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
IGRGNQYQGITEIGIEHLDLALANHAQIKEAKR
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377