Click here to switch to the map view.

The map label for this gene is ysdC

Identifier: 16079934

GI number:

Start: 2950221

End: 2951306

Strand: Reverse

Name: ysdC

Synonym: BSU28820

Alternate gene names: NA

Gene position: NA

Preceding gene: 16079936

Following gene: 255767665

Centisome position: NA

GC content: NA

Gene sequence:

>1086_bases
ATGGCAAAATTAGATGAAACATTGACCATGCTGAAAGATTTAACAGATGCAAAAGGCATACCGGGCAATGAAAGAGAAGT
AAGGCAAGTGATGAAATCATACATAGAACCATTTGCTGATGAGGTGACAACAGATCGCCTGGGCAGTTTAATTGCAAAAA
AAACTGGTGCAGAAAACGGCCCGAAAATTATGATCGCCGGACATTTGGATGAAGTCGGCTTTATGGTGACACAAATCACA
GATAAAGGCTTTATCCGTTTTCAAACCGTTGGCGGCTGGTGGGCTCAGGTTATGCTTGCTCAGCGCGTCACCATTGTCAC
AAAAAAAGGAGAAATCACAGGGGTTATCGGATCTAAGCCGCCTCATATTTTGTCTCCTGAAGCAAGAAAAAAATCAGTGG
AAATAAAAGACATGTTTATTGATATTGGAGCTTCAAGCCGGGAAGAAGCCTTGGAGTGGGGTGTACTTCCGGGAGATATG
ATCGTTCCGCATTTTGAATTTACGGTCATGAACAATGAAAAATTCCTACTCGCAAAGGCCTGGGACAACCGCATCGGCTG
TGCGATTGCTATTGATGTGTTAAGAAACTTACAAAACACAGATCATCCAAATATAGTGTATGGCGTCGGAACCGTGCAGG
AGGAAGTCGGGCTGAGGGGAGCGAAAACGGCTGCACACACCATTCAGCCTGATATTGCGTTTGGTGTTGATGTAGGGATA
GCAGGAGACACGCCTGGCATTTCCGAGAAGGAAGCGCAGAGCAAAATGGGCAAAGGCCCGCAGATTATCGTTTACGATGC
ATCCATGGTCTCTCACAAAGGTTTGCGCGATGCAGTTGTAGCCACTGCGGAGGAAGCCGGCATTCCGTACCAATTTGATG
CCATTGCCGGCGGCGGAACTGATTCGGGTGCCATCCATTTGACGGCAAATGGCGTTCCTGCGCTGTCCATTACCATTGCA
ACCCGCTACATTCATACGCACGCGGCCATGCTGCATCGTGATGATTATGAAAACGCGGTAAAGTTAATTACAGAAGTCAT
TAAGAAGTTAGACCGAAAAACGGTTGACGAAATTACGTACCAATAA

Upstream 100 bases:

>100_bases
CTGTAAAAACATATACCCGATTTTCAAGTGAAATAGTCGTATGGTTAGCGCCATGTTTTGTATAATAAGAATGCAGGACT
GATGAAGGAGGGTTTGGAAC

Downstream 100 bases:

>100_bases
AGATACGGAAGAATCCGCCTATTGAGGTGGATTCTATTTTTTTGTCTGTACAAATTACAGCATAGTGACTACAATAAAGG
GGATACCGAAAATTTCCTGA

Product: endo-1,4-beta-glucanase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>361_residues
MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQIT
DKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDM
IVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGI
AGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAIHLTANGVPALSITIA
TRYIHTHAAMLHRDDYENAVKLITEVIKKLDRKTVDEITYQ

Sequences:
NA

Specific function: NA

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA