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The map label for this gene is ysnD

Identifier: 16079884

GI number: 16079884

Start: 2897788

End: 2898123

Strand: Direct

Name: ysnD

Synonym: BSU28320

Alternate gene names: 16079884

Gene position: 2897788-2898123 (Clockwise)

Preceding gene: 255767647

Following gene: 16079885

Centisome position: 68.74

GC content: 52.68

Gene sequence:

>336_bases
ATGAATAAATCATTTGCAGACATGCAAGGATTTCCTGCGGGCTTTCCAAGCTTCCCCAACTTTCCGCAGCAGTACTATCC
TGCTGTCCCTCCCTTTTACCAGCAAAGCCAGCAGCCATTTGGAGGCTACGGATACGGACAGCCGTTCAGTCAGGCATACA
GCCCGTTAACCACTCCCTCTGGAATGTACTCCTCATTCCCATACGCTTCAGGATTTTACGGACAGCAATTTTCAGGTGCA
GGCTTTAGCGGCCATGGCGGCAGCTTAAGTGCTCCAGCGATACATGCCGGCGGATTCAGCGGGGCGCCAGGCGTACACGG
AGGCTTTAGATATTAA

Upstream 100 bases:

>100_bases
GTCTGACAGATCATCTTGCAATCCATTTCAATTTCGGATAGGCACTTCTCTTGTTCCCTCGGCATACATTAATGATATCT
TGCAAAGAAAAGGTGATACG

Downstream 100 bases:

>100_bases
AGAATACCACAAGGGCCGAACATCTATTGCGGTCCTTTTATTGTTTTAAAACGACTTCACAAGTACAGTCACATTTTCTG
TCTTTATATTTGGAAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MNKSFADMQGFPAGFPSFPNFPQQYYPAVPPFYQQSQQPFGGYGYGQPFSQAYSPLTTPSGMYSSFPYASGFYGQQFSGA
GFSGHGGSLSAPAIHAGGFSGAPGVHGGFRY

Sequences:

>Translated_111_residues
MNKSFADMQGFPAGFPSFPNFPQQYYPAVPPFYQQSQQPFGGYGYGQPFSQAYSPLTTPSGMYSSFPYASGFYGQQFSGA
GFSGHGGSLSAPAIHAGGFSGAPGVHGGFRY
>Mature_111_residues
MNKSFADMQGFPAGFPSFPNFPQQYYPAVPPFYQQSQQPFGGYGYGQPFSQAYSPLTTPSGMYSSFPYASGFYGQQFSGA
GFSGHGGSLSAPAIHAGGFSGAPGVHGGFRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YSND_BACSU (P94563)

Other databases:

- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   E69986
- RefSeq:   NP_390710.1
- EnsemblBacteria:   EBBACT00000002404
- GeneID:   937466
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28320
- NMPDR:   fig|224308.1.peg.2835
- GenoList:   BSU28320
- ProtClustDB:   CLSK2752470
- BioCyc:   BSUB:BSU28320-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11723; Mature: 11723

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSFADMQGFPAGFPSFPNFPQQYYPAVPPFYQQSQQPFGGYGYGQPFSQAYSPLTTPS
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCC
GMYSSFPYASGFYGQQFSGAGFSGHGGSLSAPAIHAGGFSGAPGVHGGFRY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKSFADMQGFPAGFPSFPNFPQQYYPAVPPFYQQSQQPFGGYGYGQPFSQAYSPLTTPS
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCC
GMYSSFPYASGFYGQQFSGAGFSGHGGSLSAPAIHAGGFSGAPGVHGGFRY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377