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The map label for this gene is spoVB

Identifier: 16079820

GI number: 16079820

Start: 2829564

End: 2831120

Strand: Direct

Name: spoVB

Synonym: BSU27670

Alternate gene names: 16079820

Gene position: 2829564-2831120 (Clockwise)

Preceding gene: 16079812

Following gene: 16079822

Centisome position: 67.12

GC content: 47.4

Gene sequence:

>1557_bases
ATGGCGAAACAGACGTTTTTAAAGGGCACTCTTATCCTTATCGCAGCAGGAATGGTTACAAGAATGCTCGGGTTTGTCAA
CCGGGTGGTTATCGCCCGTTTTATCGGTGAAGAAGGAGTCGGGCTTTACATGATGGCAGCGCCTACTTTCTTCTTGGCCA
CTACATTAACTCAATTCGGTCTGCCGGTCGCGATCAGCAAGCTAGTCGCTGAAGCCAGTGCGCGCGGAGATCATCAAAAA
ACGAAAAATATTTTAGTCATGTCTCTGACCATTACGGGAGTGCTCAGCCTCATCTTTACACCGCTGTTTCTGTTTTTCGC
CCCTGTTATGGCTGAAACGATGCTGACAGATAAGCGAACACTGTATCCGCTCTTGGCCATTACGCCTGTTGTGCCGATTA
TTGCTATATCGAGTGTGCTGAGGGGATACTTTCAAGGAAAACAGAATATGAACCCGCTTGCTATGTCACAAGTCCTTGAA
CAGGTTGTCCGCATTTCACTCGTGGCTGTCTGCACAACGATTTTTCTCCCTTACGGAATTGAATATGCTGCAGCGGGGGC
AATGCTATCCTCAGTGGCAGGGGAGCTGGCATCACTTCTTTATTTATTCGTTTGCTTTAAGTATAAAAAGACAATTAAAA
TCAGAAAGCATTTTTTACAGTCAATTAAAAACGGAAAACAAACCTTTACCCAATTAATGAGCGTGTCCCTTCCAACAACC
GGGAGCCGCTTTATCGGAAACCTCTCTTGGTTTTTCGAGCCAATCGTCGTCGCTCAAAGCCTTGCCATCGCCGGTGTGGC
AACAGTTGCCGCAACAAAGCAATACGGGGAACTAACCGGCTTTGCCATGACGCTGCTGACTCTGCCCAGCTTTATTACAT
ATTCTTTGTCGACCGCGCTTGTTCCTGCGATCAGTGAAGGAATGGAGCAGAAAAAATTGCAGGTGGTGGAATACCGCTTA
GAACAGGCGATGCGTCTCTGTCTGCTCAGCGGAGGCATTTCAGTTGTTATTTTATTTGTATTTGCGGATGAGCTGATGAG
AGTGATGTACGGTTCCTCAGGCGCAGCTGTATTTATAAAAGTGATGGCCCCGTTTTTTCTGCTTTATTATTTCCAAGGCC
CGCTTCAAGCTGTGCTGCAGGCGCTTAATTTGGCAGGAGCTGCGATGATGAACAGCTTAATCGGAGCGCTTGTCAAAACA
GGCCTTATTTTTGTCCTTGCCACAAGGCCTTCTCTTGGCATTATGGGCGCGGCATTAGCCATTGTGACAGGCATGGTGCT
CGTCACGCTATTGCACGCAGCAACCGTAAGCAAAGTGCTGCCGATCAGCATCAAAATCAAGGAGTACGCGCTCAGCTTCG
CTGTTATTGTAATTTGCGGATTCATCAGCTCCGCCATCAAACAATATATAAGCTTTGGAGCATCTGAGGCTGTCAATCTA
GCCGGATGGATTGCGGCGAGCGCCGCCATTTATATGATCCTCCTGCTCGTTTTCCGTTTAATTAAAAAAGATGAGCTTCG
CCGCATTCCCATTATCGGACGGTTGATCATCCGATAA

Upstream 100 bases:

>100_bases
TTTTTATTGTTTTTCAAGAAGACTTGTCATGCTTGGACGACATATACGCATATCTTTATTGTATATGATTCCAGGTAGTT
TGAGAAGGCAGGGGGTAAAA

Downstream 100 bases:

>100_bases
TGGTCACGTGCGGTGCCCATCTTTTTCATCAATATATATTTCTCCGTCTGTAAACGAGCAAAATGAAATATCTGAAGGGT
TTGTGTATCCGTGTTTTTGC

Product: translocase

Products: NA

Alternate protein names: Stage III sporulation protein F

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MAKQTFLKGTLILIAAGMVTRMLGFVNRVVIARFIGEEGVGLYMMAAPTFFLATTLTQFGLPVAISKLVAEASARGDHQK
TKNILVMSLTITGVLSLIFTPLFLFFAPVMAETMLTDKRTLYPLLAITPVVPIIAISSVLRGYFQGKQNMNPLAMSQVLE
QVVRISLVAVCTTIFLPYGIEYAAAGAMLSSVAGELASLLYLFVCFKYKKTIKIRKHFLQSIKNGKQTFTQLMSVSLPTT
GSRFIGNLSWFFEPIVVAQSLAIAGVATVAATKQYGELTGFAMTLLTLPSFITYSLSTALVPAISEGMEQKKLQVVEYRL
EQAMRLCLLSGGISVVILFVFADELMRVMYGSSGAAVFIKVMAPFFLLYYFQGPLQAVLQALNLAGAAMMNSLIGALVKT
GLIFVLATRPSLGIMGAALAIVTGMVLVTLLHAATVSKVLPISIKIKEYALSFAVIVICGFISSAIKQYISFGASEAVNL
AGWIAASAAIYMILLLVFRLIKKDELRRIPIIGRLIIR

Sequences:

>Translated_518_residues
MAKQTFLKGTLILIAAGMVTRMLGFVNRVVIARFIGEEGVGLYMMAAPTFFLATTLTQFGLPVAISKLVAEASARGDHQK
TKNILVMSLTITGVLSLIFTPLFLFFAPVMAETMLTDKRTLYPLLAITPVVPIIAISSVLRGYFQGKQNMNPLAMSQVLE
QVVRISLVAVCTTIFLPYGIEYAAAGAMLSSVAGELASLLYLFVCFKYKKTIKIRKHFLQSIKNGKQTFTQLMSVSLPTT
GSRFIGNLSWFFEPIVVAQSLAIAGVATVAATKQYGELTGFAMTLLTLPSFITYSLSTALVPAISEGMEQKKLQVVEYRL
EQAMRLCLLSGGISVVILFVFADELMRVMYGSSGAAVFIKVMAPFFLLYYFQGPLQAVLQALNLAGAAMMNSLIGALVKT
GLIFVLATRPSLGIMGAALAIVTGMVLVTLLHAATVSKVLPISIKIKEYALSFAVIVICGFISSAIKQYISFGASEAVNL
AGWIAASAAIYMILLLVFRLIKKDELRRIPIIGRLIIR
>Mature_517_residues
AKQTFLKGTLILIAAGMVTRMLGFVNRVVIARFIGEEGVGLYMMAAPTFFLATTLTQFGLPVAISKLVAEASARGDHQKT
KNILVMSLTITGVLSLIFTPLFLFFAPVMAETMLTDKRTLYPLLAITPVVPIIAISSVLRGYFQGKQNMNPLAMSQVLEQ
VVRISLVAVCTTIFLPYGIEYAAAGAMLSSVAGELASLLYLFVCFKYKKTIKIRKHFLQSIKNGKQTFTQLMSVSLPTTG
SRFIGNLSWFFEPIVVAQSLAIAGVATVAATKQYGELTGFAMTLLTLPSFITYSLSTALVPAISEGMEQKKLQVVEYRLE
QAMRLCLLSGGISVVILFVFADELMRVMYGSSGAAVFIKVMAPFFLLYYFQGPLQAVLQALNLAGAAMMNSLIGALVKTG
LIFVLATRPSLGIMGAALAIVTGMVLVTLLHAATVSKVLPISIKIKEYALSFAVIVICGFISSAIKQYISFGASEAVNLA
GWIAASAAIYMILLLVFRLIKKDELRRIPIIGRLIIR

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SP5B_BACSU (Q00758)

Other databases:

- EMBL:   M76666
- EMBL:   Y15896
- EMBL:   AL009126
- PIR:   I39989
- RefSeq:   NP_390645.1
- ProteinModelPortal:   Q00758
- EnsemblBacteria:   EBBACT00000000432
- GeneID:   938022
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27670
- NMPDR:   fig|224308.1.peg.2770
- GenoList:   BSU27670
- GeneTree:   EBGT00070000031814
- HOGENOM:   HBG712836
- OMA:   AIPSCLG
- ProtClustDB:   CLSK872967
- BioCyc:   BSUB:BSU27670-MONOMER
- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249
- PANTHER:   PTHR11206
- TIGRFAMs:   TIGR02900

Pfam domain/function: PF01943 Polysacc_synt

EC number: NA

Molecular weight: Translated: 56080; Mature: 55948

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x105fd0c0)-; HASH(0x10e94444)-; HASH(0x10df9f04)-; HASH(0x115fd28c)-; HASH(0x115d6e64)-; HASH(0x115f9f7c)-; HASH(0x110fcb80)-; HASH(0x1159bf2c)-; HASH(0x113def88)-; HASH(0x10ef314c)-; HASH(0xe677b90)-; HASH(0x110bbae8)-; HASH(0x11184f60)-; HASH(0x1120a6fc)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHCH
>Mature Secondary Structure 
AKQTFLKGTLILIAAGMVTRMLGFVNRVVIARFIGEEGVGLYMMAAPTFFLATTLTQFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHC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HHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377