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The map label for this gene is yrdF

Identifier: 16079726

GI number: 16079726

Start: 2730560

End: 2730835

Strand: Reverse

Name: yrdF

Synonym: BSU26730

Alternate gene names: 16079726

Gene position: 2730835-2730560 (Counterclockwise)

Preceding gene: 16079727

Following gene: 16079725

Centisome position: 64.78

GC content: 33.33

Gene sequence:

>276_bases
ATGAGAAAAATAATAATAGATGGAAGAGACTTTGAAAATATAGAAGTTTTACATGATGATTTAAAAGATAAACTAGACTT
CCCAGACTACTATGGGAGAAATTTAGACGCTTTATGGGATTGCCTGACAGGGTGGGTGGATTTGCCGCTCACTTTAGTCT
TGAAAAATTTTGAGTTCAGCAATACATTTTTAGGTTCATACGCTGACGATGTATTAGAAGTTATACAAGAGGCTCAAGAA
GAACTAAAGGACGAATTTAAAATAATAATAGAGTAG

Upstream 100 bases:

>100_bases
TCCTATCGGTGTTTTTTATTTGTTTTCAGCCTCATTTGGACAAACAGCTGTTACATAGTAAACGTTTGTTAAGATAAAAT
AATGGAGGGCATAGTTTCTA

Downstream 100 bases:

>100_bases
ACTTTCTGTTTTGCGAATTTTAACAATTTTCGTTCGCGGAAAAAGGCAATAGGGCACCGCAAATTCAATTTTCGGTGAGA
CCGCAATAACTTTTTGGCTT

Product: ribonuclease inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MRKIIIDGRDFENIEVLHDDLKDKLDFPDYYGRNLDALWDCLTGWVDLPLTLVLKNFEFSNTFLGSYADDVLEVIQEAQE
ELKDEFKIIIE

Sequences:

>Translated_91_residues
MRKIIIDGRDFENIEVLHDDLKDKLDFPDYYGRNLDALWDCLTGWVDLPLTLVLKNFEFSNTFLGSYADDVLEVIQEAQE
ELKDEFKIIIE
>Mature_91_residues
MRKIIIDGRDFENIEVLHDDLKDKLDFPDYYGRNLDALWDCLTGWVDLPLTLVLKNFEFSNTFLGSYADDVLEVIQEAQE
ELKDEFKIIIE

Specific function: Unknown

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRDF_BACSU (O07938)

Other databases:

- EMBL:   Y11043
- EMBL:   U93876
- EMBL:   AL009126
- PIR:   C69973
- RefSeq:   NP_390550.1
- HSSP:   P11540
- ProteinModelPortal:   O07938
- SMR:   O07938
- EnsemblBacteria:   EBBACT00000000085
- GeneID:   936691
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26730
- NMPDR:   fig|224308.1.peg.2675
- GenoList:   BSU26730
- GeneTree:   EBGT00050000002005
- HOGENOM:   HBG642306
- OMA:   ENADALW
- ProtClustDB:   CLSK882593
- BioCyc:   BSUB:BSU26730-MONOMER
- GO:   GO:0005737
- InterPro:   IPR000468

Pfam domain/function: PF01337 Barstar

EC number: NA

Molecular weight: Translated: 10728; Mature: 10728

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIIDGRDFENIEVLHDDLKDKLDFPDYYGRNLDALWDCLTGWVDLPLTLVLKNFEFS
CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NTFLGSYADDVLEVIQEAQEELKDEFKIIIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKIIIDGRDFENIEVLHDDLKDKLDFPDYYGRNLDALWDCLTGWVDLPLTLVLKNFEFS
CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NTFLGSYADDVLEVIQEAQEELKDEFKIIIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377