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The map label for this gene is yrkI

Identifier: 16079703

GI number: 16079703

Start: 2710848

End: 2711075

Strand: Reverse

Name: yrkI

Synonym: BSU26500

Alternate gene names: 16079703

Gene position: 2711075-2710848 (Counterclockwise)

Preceding gene: 255767613

Following gene: 16079702

Centisome position: 64.31

GC content: 39.47

Gene sequence:

>228_bases
ATGAAATCAGATAAAGTATTAGACGCAAAAGGCTTGGCATGCCCAATGCCAATTGTCAGAACAAAAAAAGCGATGAATGA
ACTGGAATCAGGTCAAATATTAGAAGTGCATGCAACAGATAAGGGAGCCAAAAATGATCTTACAGCCTGGTCTAAATCAG
GCGGACATGACCTTTTAGAGCAAACGGACGAGGGCGATATATTGAAATTTTGGATTCAAAAAGGCTAA

Upstream 100 bases:

>100_bases
AATCAGCCCAGATGAAGAAAAACAGCGTGAAATGGAGATTGGCCCAAACCGCTGTGCAATACGGTAACACAAGTTTCTGC
TAAAAAGAGGAGAGAAGAAC

Downstream 100 bases:

>100_bases
TGAATGTGAAAGGGTATCGAATAGAAAGATACCCTTTTCCTATGAAAGGAGGCAAATAAAATGGATATTGCCTTTATCAC
AACTCTTTTCATTATAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKSDKVLDAKGLACPMPIVRTKKAMNELESGQILEVHATDKGAKNDLTAWSKSGGHDLLEQTDEGDILKFWIQKG

Sequences:

>Translated_75_residues
MKSDKVLDAKGLACPMPIVRTKKAMNELESGQILEVHATDKGAKNDLTAWSKSGGHDLLEQTDEGDILKFWIQKG
>Mature_75_residues
MKSDKVLDAKGLACPMPIVRTKKAMNELESGQILEVHATDKGAKNDLTAWSKSGGHDLLEQTDEGDILKFWIQKG

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRKI_BACSU (P54436)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   G69976
- RefSeq:   NP_390527.1
- ProteinModelPortal:   P54436
- SMR:   P54436
- EnsemblBacteria:   EBBACT00000001981
- GeneID:   937657
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26500
- NMPDR:   fig|224308.1.peg.2652
- GenoList:   BSU26500
- GeneTree:   EBGT00050000000398
- HOGENOM:   HBG731190
- OMA:   RYWLRKA
- ProtClustDB:   CLSK2301474
- BioCyc:   BSUB:BSU26500-MONOMER
- GO:   GO:0005737
- InterPro:   IPR001455
- Gene3D:   G3DSA:3.30.110.40

Pfam domain/function: PF01206 SirA; SSF64307 SirA_like

EC number: NA

Molecular weight: Translated: 8239; Mature: 8239

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDKVLDAKGLACPMPIVRTKKAMNELESGQILEVHATDKGAKNDLTAWSKSGGHDLLE
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH
QTDEGDILKFWIQKG
CCCCCCEEEEEEECC
>Mature Secondary Structure
MKSDKVLDAKGLACPMPIVRTKKAMNELESGQILEVHATDKGAKNDLTAWSKSGGHDLLE
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH
QTDEGDILKFWIQKG
CCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377