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The map label for this gene is yqaQ

Identifier: 16079675

GI number: 16079675

Start: 2690989

End: 2691444

Strand: Reverse

Name: yqaQ

Synonym: BSU26220

Alternate gene names: 16079675

Gene position: 2691444-2690989 (Counterclockwise)

Preceding gene: 16079677

Following gene: 16079674

Centisome position: 63.84

GC content: 40.13

Gene sequence:

>456_bases
ATGAATCGAAAAGAAATTGAAAATCTAATCAATAGCTATCACTGGATGGTGAAAGAGGTTCGTCGATTGCAAAGGGTACT
CTATGGTTCAGTAATTCCCATGAAGAATTGGGGTGTTGCTCAATATGGATTAGAAGCTACTATGCCAAAAGGAAGTCCTG
GGAAGAGTCAGGCTGAGCTAAGGCAAATGGATATGAGAGAGGAACGTCTTTTCAAACGTCTTAAGTATTATGAAGAGCGA
GTATATGCAGTTGAATTAGGGGCTGAAAAGATCCATGGTGAGCAGCATAAAGTCATTTATGATTGCATGATGGAGGGTAT
GAGCTACCGCGCAATAAGTCTTCACCTTGGCATTTCAAGGGAAACTGTACGCAAAATGAAAGATGAGTTCATCAGCCAAT
TATGCCAAGATTGCCACTTTGAGCGTTTGTTGAATCTGAAAAAATCTGTAGTGTAA

Upstream 100 bases:

>100_bases
TATCCAGTTAGTCCAAGACGGAAAGCCTGCGGACACTGAACTTACAGTATTACGCTGTATGTTTGGTGTCCGTTTTTATT
TTGAAAAGGAGGATACTTTC

Downstream 100 bases:

>100_bases
AATGGGAGGCAGGTCGGCGCGGCGAATTATTCCTGCGTCACCACTAAATTTAGGTTTTATACAACAGTTTCGTTCGACAA
ATTTTGCGAATAGTACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNRKEIENLINSYHWMVKEVRRLQRVLYGSVIPMKNWGVAQYGLEATMPKGSPGKSQAELRQMDMREERLFKRLKYYEER
VYAVELGAEKIHGEQHKVIYDCMMEGMSYRAISLHLGISRETVRKMKDEFISQLCQDCHFERLLNLKKSVV

Sequences:

>Translated_151_residues
MNRKEIENLINSYHWMVKEVRRLQRVLYGSVIPMKNWGVAQYGLEATMPKGSPGKSQAELRQMDMREERLFKRLKYYEER
VYAVELGAEKIHGEQHKVIYDCMMEGMSYRAISLHLGISRETVRKMKDEFISQLCQDCHFERLLNLKKSVV
>Mature_151_residues
MNRKEIENLINSYHWMVKEVRRLQRVLYGSVIPMKNWGVAQYGLEATMPKGSPGKSQAELRQMDMREERLFKRLKYYEER
VYAVELGAEKIHGEQHKVIYDCMMEGMSYRAISLHLGISRETVRKMKDEFISQLCQDCHFERLLNLKKSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis pcf and to sigma factors

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQAQ_BACSU (P45948)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   H69945
- RefSeq:   NP_390499.1
- ProteinModelPortal:   P45948
- EnsemblBacteria:   EBBACT00000002519
- GeneID:   937693
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26220
- NMPDR:   fig|224308.1.peg.2624
- GenoList:   BSU26220
- GeneTree:   EBGT00050000006362
- HOGENOM:   HBG534565
- OMA:   MEGMSYR
- ProtClustDB:   CLSK806655
- BioCyc:   BSUB:BSU26220-MONOMER
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17932; Mature: 17932

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKEIENLINSYHWMVKEVRRLQRVLYGSVIPMKNWGVAQYGLEATMPKGSPGKSQAEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHCCCCCCCCCHHHHH
RQMDMREERLFKRLKYYEERVYAVELGAEKIHGEQHKVIYDCMMEGMSYRAISLHLGISR
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHCCCCHHHEEEEECCCH
ETVRKMKDEFISQLCQDCHFERLLNLKKSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRKEIENLINSYHWMVKEVRRLQRVLYGSVIPMKNWGVAQYGLEATMPKGSPGKSQAEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHCCCCCCCCCHHHHH
RQMDMREERLFKRLKYYEERVYAVELGAEKIHGEQHKVIYDCMMEGMSYRAISLHLGISR
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHCCCCHHHEEEEECCCH
ETVRKMKDEFISQLCQDCHFERLLNLKKSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895