Click here to switch to the map view.

The map label for this gene is yqeH

Identifier: 16079621

GI number: 16079621

Start: 2645490

End: 2646590

Strand: Reverse

Name: yqeH

Synonym: BSU25670

Alternate gene names: 16079621

Gene position: 2646590-2645490 (Counterclockwise)

Preceding gene: 16079622

Following gene: 255767590

Centisome position: 62.78

GC content: 42.23

Gene sequence:

>1101_bases
ATGGAAAAGGTTGTTTGTATCGGGTGCGGAGTTACGATCCAAACCGAGGACAAAACAGGTTTGGGGTACGCGCCGCCTGC
ATCGCTTACGAAAGAAAATGTGATTTGCCAGCGTTGCTTCAGACTGAAAAACTATAATGAAATACAAGATGTCTCCTTAA
CTGATGATGATTTTTTGAACATTCTTCACGGTATTGGAGAAACGGACTCTCTGGTCGTAAAAATTGTTGATATTTTTGAT
TTTAACGGCAGCTGGATTAATGGGCTGCAGCGCTTGGTGGGGGGAAACCCTATCTTATTAGTTGGCAATAAAGCGGATAT
TTTGCCTAAGTCACTGAAAAGAGAGCGTCTGATCCAATGGATGAAGCGTGAAGCGAAAGAGCTTGGCTTAAAACCGGTTG
ACGTATTTTTGGTCAGTGCGGGTCGCGGCCAGGGAATCAGAGAAGTAATTGACGCGATTGAGCATTACCGCAACGGAAAA
GACGTCTATGTTGTCGGATGTACAAATGTAGGAAAGTCAACCTTTATTAACCGGATTATTAAAGAAGTGTCAGGTGAAGA
AGATATTATTACAACATCCCAATTTCCTGGCACAACCCTTGATGCGATTGAAATCCCGCTGGATGACGGTTCATCGCTTT
ATGATACACCGGGAATTATCAACAACCATCAAATGGCGCATTATGTCAATAAAAAGGACCTGAAAATATTATCTCCTAAA
AAGGAGCTGAAGCCTCGCACATTCCAGCTTAATGATCAGCAAACACTGTATTTTGGCGGACTTGCAAGGTTTGATTATGT
GTCTGGGGAAAGATCTCCTTTTATTTGCTATATGCCGAATGAGCTGATGATTCATAGAACAAAACTTGAAAATGCAGACG
CGCTTTATGAAAAGCATGCAGGGGAATTGCTCACACCTCCGGGTAAAGATGAAATGGATGAGTTTCCTGAATTGGTCGCC
CATACGTTTACGATAAAAGACAAAAAGACAGATATCGTTTTCTCTGGGTTAGGCTGGGTTACTGTCCATGACGCTGATAA
AAAGGTAACTGCATACGCGCCAAAAGGCGTTCATGTATTTGTTCGGCGTTCATTAATTTAA

Upstream 100 bases:

>100_bases
TTCCTCTGACGGATTCATTACGCGCTTTAACCGCCAGGTCGAACGCAGAATACTGAGTGCTCTCAAACGAAAAGGGCACA
TTCAGTGGGAGGAGTAAGAA

Downstream 100 bases:

>100_bases
GAAAAGGGGAGAGGTGTATGAAAAAGCTGTACGGGGTTATCGGAAATCCTATTGGCCATTCTATGTCACCTGATATTCAT
AACGCATCATTGAAAGACCT

Product: GTP-binding protein YqeH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MEKVVCIGCGVTIQTEDKTGLGYAPPASLTKENVICQRCFRLKNYNEIQDVSLTDDDFLNILHGIGETDSLVVKIVDIFD
FNGSWINGLQRLVGGNPILLVGNKADILPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGK
DVYVVGCTNVGKSTFINRIIKEVSGEEDIITTSQFPGTTLDAIEIPLDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPK
KELKPRTFQLNDQQTLYFGGLARFDYVSGERSPFICYMPNELMIHRTKLENADALYEKHAGELLTPPGKDEMDEFPELVA
HTFTIKDKKTDIVFSGLGWVTVHDADKKVTAYAPKGVHVFVRRSLI

Sequences:

>Translated_366_residues
MEKVVCIGCGVTIQTEDKTGLGYAPPASLTKENVICQRCFRLKNYNEIQDVSLTDDDFLNILHGIGETDSLVVKIVDIFD
FNGSWINGLQRLVGGNPILLVGNKADILPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGK
DVYVVGCTNVGKSTFINRIIKEVSGEEDIITTSQFPGTTLDAIEIPLDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPK
KELKPRTFQLNDQQTLYFGGLARFDYVSGERSPFICYMPNELMIHRTKLENADALYEKHAGELLTPPGKDEMDEFPELVA
HTFTIKDKKTDIVFSGLGWVTVHDADKKVTAYAPKGVHVFVRRSLI
>Mature_366_residues
MEKVVCIGCGVTIQTEDKTGLGYAPPASLTKENVICQRCFRLKNYNEIQDVSLTDDDFLNILHGIGETDSLVVKIVDIFD
FNGSWINGLQRLVGGNPILLVGNKADILPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGK
DVYVVGCTNVGKSTFINRIIKEVSGEEDIITTSQFPGTTLDAIEIPLDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPK
KELKPRTFQLNDQQTLYFGGLARFDYVSGERSPFICYMPNELMIHRTKLENADALYEKHAGELLTPPGKDEMDEFPELVA
HTFTIKDKKTDIVFSGLGWVTVHDADKKVTAYAPKGVHVFVRRSLI

Specific function: Binds GTP and GDP

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain

Homologues:

Organism=Homo sapiens, GI14150078, Length=173, Percent_Identity=36.4161849710983, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17537249, Length=229, Percent_Identity=32.7510917030568, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573544, Length=230, Percent_Identity=32.6086956521739, Blast_Score=108, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQEH_BACSU (P54453)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   D69951
- RefSeq:   NP_390445.1
- ProteinModelPortal:   P54453
- SMR:   P54453
- EnsemblBacteria:   EBBACT00000001329
- GeneID:   937822
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25670
- NMPDR:   fig|224308.1.peg.2570
- GenoList:   BSU25670
- GeneTree:   EBGT00050000001284
- HOGENOM:   HBG476588
- OMA:   RTKLENA
- ProtClustDB:   PRK13796
- BioCyc:   BSUB:BSU25670-MONOMER
- GO:   GO:0005622
- InterPro:   IPR019988
- InterPro:   IPR002917
- TIGRFAMs:   TIGR03597

Pfam domain/function: PF01926 MMR_HSR1

EC number: NA

Molecular weight: Translated: 41000; Mature: 41000

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVVCIGCGVTIQTEDKTGLGYAPPASLTKENVICQRCFRLKNYNEIQDVSLTDDDFLN
CCCEEEEECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
ILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADILPKSLKRERLIQW
HHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHH
MKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGCTNVGKSTFINRII
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
KEVSGEEDIITTSQFPGTTLDAIEIPLDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPK
HHHCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCH
KELKPRTFQLNDQQTLYFGGLARFDYVSGERSPFICYMPNELMIHRTKLENADALYEKHA
HHCCCCEEEECCCCEEEECCEEEEEECCCCCCCEEEECCCCEEEEEECCCCHHHHHHHCC
GELLTPPGKDEMDEFPELVAHTFTIKDKKTDIVFSGLGWVTVHDADKKVTAYAPKGVHVF
CCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEEECCCEEEEECCCCEEEEECCCCEEEE
VRRSLI
EEECCC
>Mature Secondary Structure
MEKVVCIGCGVTIQTEDKTGLGYAPPASLTKENVICQRCFRLKNYNEIQDVSLTDDDFLN
CCCEEEEECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
ILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADILPKSLKRERLIQW
HHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHH
MKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGCTNVGKSTFINRII
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
KEVSGEEDIITTSQFPGTTLDAIEIPLDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPK
HHHCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCH
KELKPRTFQLNDQQTLYFGGLARFDYVSGERSPFICYMPNELMIHRTKLENADALYEKHA
HHCCCCEEEECCCCEEEECCEEEEEECCCCCCCEEEECCCCEEEEEECCCCHHHHHHHCC
GELLTPPGKDEMDEFPELVAHTFTIKDKKTDIVFSGLGWVTVHDADKKVTAYAPKGVHVF
CCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEEECCCEEEEECCCCEEEEECCCCEEEE
VRRSLI
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377