Click here to switch to the map view.

The map label for this gene is yqeZ

Identifier: 16079593

GI number: 16079593

Start: 2618466

End: 2619779

Strand: Reverse

Name: yqeZ

Synonym: BSU25390

Alternate gene names: 16079593

Gene position: 2619779-2618466 (Counterclockwise)

Preceding gene: 16079594

Following gene: 16079592

Centisome position: 62.14

GC content: 46.42

Gene sequence:

>1314_bases
TTGCTTCAAATCAAAGGATTCCGTGCTGCTCTTTTGGGTATATTTTTACTTTCTTTATTAGGCGTACAGCTGAACGCAAA
AGCAGAAAAACAAACTGTTTATGTGATCCCGGTTGAAAAAAATGTCGAACAGGGTCTCGCCTCGTTTTTGTCCCGTTCGT
TACAAGACGCAAAGGATGCACATGCAGACCATATTATTCTTGATATCAATACCCCGGGGGGATTGGTCAAATCTGCTATT
GATATGGCCGATTTGATAACCGAAAGCGAGATCCCCGTAACTGCATATGTCAACAAACGCGCGTTGTCTGCTGGTGCATA
TATTGCACTTCAAGCAGATCACATTTATATGGCGCCTGGCGGAAAAATGGGAGCCGCCGCGATTGTTGATGGCCAAGGCA
ATGCCGCTGACCAAAAAGCTCAATCACTTTGGCTGGCAGAGATGGAAGATGCCGCAGTGAAAAATAACCGCGATCCAAAA
TATGCGCTCGCAATGGCTGACCCAGATATAGATGCCAAGGAAGTTGGCGCGCCTAAGGGAGATCTGCTGACACTTAACGC
AGACAAGGCGATTGAGGTAGGCTATTCAGAAGGCACTGCTGACAATTTGTCCACGCTCGTAAAGAAGCTTGGGTTCGAAA
AGGCGCAGATCAGCTATGCAAAGGAGAGCTTTGCGGAAAAGACGGCAAGATGGCTGACGAATCCGGTCATTGTCCCTATT
CTGCTGACAATCGCTTTTTTAGGTCTGACGGTAGAGCTTTTTTCCCCGGGTGTCGGCCTCCCTGGAACGGCTGGACTCAT
TGCGTTATTGCTGTTCTTTTACGGGCATCTTGCAGCCGGCCTTGCCGGGTATGAGACGGTTCTCCTCTTTATAGCAGGGG
TGATTCTCATTCTGCTTGAGATTTTTCTTCCCGGAGGAATCATTGGATTACTGGGCTTGGGAGCGATTATTGCGAGCCTG
TTTTTAGCCGCGGGGAGCTTCACTGTCATGGCGGTTTCTCTCTTGATCGCCTCAGCTGTTTCGATTACAGCTTTTATTTT
ACTGACAAGGGTGTTGGGAAAGCGTATGAAATTCTTTAAGAAATTGATATTAAATGATTCTACAAACACGGAGAGCGGCT
ACGTTTCAAATCAAACGCGCACGGACTTAATGGGAAAAGTGGGTATAACCTTTACACCGCTGCGTCCTTCCGGTACCGTG
ATTATTGATGATGAACGCCTTGACGTTGTATCGGAGGGATCGTTTACAGAAAAAGATAAAAAAGTAAAAGTGATAAAAGT
AGAAGGCTCACGCATTGTCGTGAGAGAAATTTAA

Upstream 100 bases:

>100_bases
AGATGTCTTTTTTTATACATAAAAAAATGAAACCTTTGATACATTTGTTACGTATGAAGAGAAGGCACTTATTATAAAAG
GAAGGAGGGATACACCGCCC

Downstream 100 bases:

>100_bases
ATAGAAACGAGGAGAAGTTATATGGATCCGTCAACACTTATGATTCTGGCAATTGTCGCAGTAGCGATCATTGTTTTGGC
AGTATTTTTTACATTTGTGC

Product: membrane bound hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MLQIKGFRAALLGIFLLSLLGVQLNAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKDAHADHIILDINTPGGLVKSAI
DMADLITESEIPVTAYVNKRALSAGAYIALQADHIYMAPGGKMGAAAIVDGQGNAADQKAQSLWLAEMEDAAVKNNRDPK
YALAMADPDIDAKEVGAPKGDLLTLNADKAIEVGYSEGTADNLSTLVKKLGFEKAQISYAKESFAEKTARWLTNPVIVPI
LLTIAFLGLTVELFSPGVGLPGTAGLIALLLFFYGHLAAGLAGYETVLLFIAGVILILLEIFLPGGIIGLLGLGAIIASL
FLAAGSFTVMAVSLLIASAVSITAFILLTRVLGKRMKFFKKLILNDSTNTESGYVSNQTRTDLMGKVGITFTPLRPSGTV
IIDDERLDVVSEGSFTEKDKKVKVIKVEGSRIVVREI

Sequences:

>Translated_437_residues
MLQIKGFRAALLGIFLLSLLGVQLNAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKDAHADHIILDINTPGGLVKSAI
DMADLITESEIPVTAYVNKRALSAGAYIALQADHIYMAPGGKMGAAAIVDGQGNAADQKAQSLWLAEMEDAAVKNNRDPK
YALAMADPDIDAKEVGAPKGDLLTLNADKAIEVGYSEGTADNLSTLVKKLGFEKAQISYAKESFAEKTARWLTNPVIVPI
LLTIAFLGLTVELFSPGVGLPGTAGLIALLLFFYGHLAAGLAGYETVLLFIAGVILILLEIFLPGGIIGLLGLGAIIASL
FLAAGSFTVMAVSLLIASAVSITAFILLTRVLGKRMKFFKKLILNDSTNTESGYVSNQTRTDLMGKVGITFTPLRPSGTV
IIDDERLDVVSEGSFTEKDKKVKVIKVEGSRIVVREI
>Mature_437_residues
MLQIKGFRAALLGIFLLSLLGVQLNAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKDAHADHIILDINTPGGLVKSAI
DMADLITESEIPVTAYVNKRALSAGAYIALQADHIYMAPGGKMGAAAIVDGQGNAADQKAQSLWLAEMEDAAVKNNRDPK
YALAMADPDIDAKEVGAPKGDLLTLNADKAIEVGYSEGTADNLSTLVKKLGFEKAQISYAKESFAEKTARWLTNPVIVPI
LLTIAFLGLTVELFSPGVGLPGTAGLIALLLFFYGHLAAGLAGYETVLLFIAGVILILLEIFLPGGIIGLLGLGAIIASL
FLAAGSFTVMAVSLLIASAVSITAFILLTRVLGKRMKFFKKLILNDSTNTESGYVSNQTRTDLMGKVGITFTPLRPSGTV
IIDDERLDVVSEGSFTEKDKKVKVIKVEGSRIVVREI

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQEZ_BACSU (P54465)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   H69952
- RefSeq:   NP_390417.1
- ProteinModelPortal:   P54465
- EnsemblBacteria:   EBBACT00000001532
- GeneID:   937859
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25390
- NMPDR:   fig|224308.1.peg.2542
- GenoList:   BSU25390
- GeneTree:   EBGT00050000002644
- HOGENOM:   HBG729543
- OMA:   PKYALAM
- ProtClustDB:   CLSK872998
- BioCyc:   BSUB:BSU25390-MONOMER
- InterPro:   IPR002810
- InterPro:   IPR002825

Pfam domain/function: PF01972 DUF114; PF01957 NfeD

EC number: NA

Molecular weight: Translated: 46463; Mature: 46463

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf7a3118)-; HASH(0x109cff94)-; HASH(0x107d1fb8)-; HASH(0xdedb840)-; HASH(0x10088934)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQIKGFRAALLGIFLLSLLGVQLNAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKDA
CCEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
HADHIILDINTPGGLVKSAIDMADLITESEIPVTAYVNKRALSAGAYIALQADHIYMAPG
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCEEEEEEECEEEECCC
GKMGAAAIVDGQGNAADQKAQSLWLAEMEDAAVKNNRDPKYALAMADPDIDAKEVGAPKG
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCCCC
DLLTLNADKAIEVGYSEGTADNLSTLVKKLGFEKAQISYAKESFAEKTARWLTNPVIVPI
CEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLTIAFLGLTVELFSPGVGLPGTAGLIALLLFFYGHLAAGLAGYETVLLFIAGVILILLE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFLPGGIIGLLGLGAIIASLFLAAGSFTVMAVSLLIASAVSITAFILLTRVLGKRMKFFK
HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLILNDSTNTESGYVSNQTRTDLMGKVGITFTPLRPSGTVIIDDERLDVVSEGSFTEKDK
HHHHCCCCCCCCCEECCCHHHHHHHCCCCEEECCCCCCCEEECCCCCCEECCCCCCCCCC
KVKVIKVEGSRIVVREI
CEEEEEEECCEEEEEEH
>Mature Secondary Structure
MLQIKGFRAALLGIFLLSLLGVQLNAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKDA
CCEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
HADHIILDINTPGGLVKSAIDMADLITESEIPVTAYVNKRALSAGAYIALQADHIYMAPG
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCEEEEEEECEEEECCC
GKMGAAAIVDGQGNAADQKAQSLWLAEMEDAAVKNNRDPKYALAMADPDIDAKEVGAPKG
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCCCC
DLLTLNADKAIEVGYSEGTADNLSTLVKKLGFEKAQISYAKESFAEKTARWLTNPVIVPI
CEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLTIAFLGLTVELFSPGVGLPGTAGLIALLLFFYGHLAAGLAGYETVLLFIAGVILILLE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFLPGGIIGLLGLGAIIASLFLAAGSFTVMAVSLLIASAVSITAFILLTRVLGKRMKFFK
HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLILNDSTNTESGYVSNQTRTDLMGKVGITFTPLRPSGTVIIDDERLDVVSEGSFTEKDK
HHHHCCCCCCCCCEECCCHHHHHHHCCCCEEECCCCCCCEEECCCCCCEECCCCCCCCCC
KVKVIKVEGSRIVVREI
CEEEEEEECCEEEEEEH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377