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The map label for this gene is yqfC

Identifier: 16079590

GI number: 16079590

Start: 2616667

End: 2616948

Strand: Reverse

Name: yqfC

Synonym: BSU25360

Alternate gene names: 16079590

Gene position: 2616948-2616667 (Counterclockwise)

Preceding gene: 255767583

Following gene: 255767582

Centisome position: 62.08

GC content: 43.97

Gene sequence:

>282_bases
ATGGGGCAAAGAAAGAATCGTATGAAAGCTTGGCTGACAAGAGCATTGGAAATTCCCCCGGACGTTATGATGGATCTGCC
GAGGATTACAATGGTTGGCAGACTTCATATCTACATAGAAAACCACAGAGGCCTTTTGCTTTTCAGTGAGAATGAAGTGC
GGCTGATGCTGAAGCAGGGCCAGTGCATCATATCTGGTAAAAATTTTGTCATCAAGGCGATTCTTCCGGAAGAGATACTT
TTGGAGGGTACGATTGATGTCGTTCGATATGTTGAGTCATAA

Upstream 100 bases:

>100_bases
CGAAAAAACCTCACCGTACGATGCGCCCGGCCCGTAAAAATTAAAGTGTTAGAACCTCCTTTCAAATCATACATATGAGA
TGAAAGGGGGTTCTTTTTGT

Downstream 100 bases:

>100_bases
AGCCGAGGGGGAAATGTTGTGAAAAATAAATGGCTGTCTTTTTTTTCGGGTAAGGTCCAGCTTGAATTGACGGGAAGAGG
GATTGAGCGGCTCCTTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MGQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSENEVRLMLKQGQCIISGKNFVIKAILPEEIL
LEGTIDVVRYVES

Sequences:

>Translated_93_residues
MGQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSENEVRLMLKQGQCIISGKNFVIKAILPEEIL
LEGTIDVVRYVES
>Mature_92_residues
GQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSENEVRLMLKQGQCIISGKNFVIKAILPEEILL
EGTIDVVRYVES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQFC_BACSU (P54468)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   C69953
- RefSeq:   NP_390414.1
- ProteinModelPortal:   P54468
- SMR:   P54468
- EnsemblBacteria:   EBBACT00000001119
- GeneID:   937870
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25360
- NMPDR:   fig|224308.1.peg.2539
- GenoList:   BSU25360
- GeneTree:   EBGT00050000002231
- HOGENOM:   HBG459704
- OMA:   LPRITMV
- ProtClustDB:   CLSK2460939
- BioCyc:   BSUB:BSU25360-MONOMER
- InterPro:   IPR022476
- InterPro:   IPR022477
- TIGRFAMs:   TIGR02856

Pfam domain/function: PF07873 YabP

EC number: NA

Molecular weight: Translated: 10791; Mature: 10660

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSENEVRLMLKQG
CCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEEEEEEECCCEEEEECCCCEEEEEECC
QCIISGKNFVIKAILPEEILLEGTIDVVRYVES
EEEEECCCEEEEEECCCHHEECCHHHHHHEECC
>Mature Secondary Structure 
GQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSENEVRLMLKQG
CCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEEEEEEECCCEEEEECCCCEEEEEECC
QCIISGKNFVIKAILPEEILLEGTIDVVRYVES
EEEEECCCEEEEEECCCHHEECCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377