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The map label for this gene is yqfW

Identifier: 16079564

GI number: 16079564

Start: 2590804

End: 2591385

Strand: Direct

Name: yqfW

Synonym: BSU25090

Alternate gene names: 16079564

Gene position: 2590804-2591385 (Clockwise)

Preceding gene: 16079562

Following gene: 16079567

Centisome position: 61.46

GC content: 39.18

Gene sequence:

>582_bases
ATGTTACGCTTAGGAATAGATATTGACGGCACAATCACGGCTCAGGATACATTCGTCCCTTATTTGAACCGTTCGTTTAA
TCTTTCCATTTCATTAAACGATATGACGGATTATGATTTAACAAAGCTGTTAAACATTACCCAGGAAGAATTTTGGGATT
GGATGAATCAAAATGAAGCGATCATATATAAGGAAGCATTGCTTGCACAGCATGCGAAACAGTCTCTCGATCTTCTCAAA
GAGGAGCACAAGCTTATTTATATTACAGCGAGACGGACTCATTTAACTGATATTACTTATGAATGGTTTGACAGACAAAA
CATTCATTATGACCACATCGAACTTGTTGGGGGTCATCACAAAGTTGAAGCGGTCAAGAATCATAACATCGACCTGTTTT
TTGAGGATCATCACGGGAACGCCATGATGATTGCGAAAGAAGCCGGGATACCGGTGATTTTGTTCAATTCCCCTTATAAT
CAGCTTCCGATTGATTCAAACATCATCAGAGTAAACAACTGGCTAGAAGCCGTTCAATGGATGAACAACAACAAGCATCA
CTTAATACGCGTCAATAACTGA

Upstream 100 bases:

>100_bases
TAGTTTGATCCATTTTGCCTGATTCATGTTTGCTAAACTTTTCTGTTAATGTCAATTGTTTATGTTACACTTGAAGGGAT
GAAACTGAAGGAGTGTGGGC

Downstream 100 bases:

>100_bases
AAAAGGAGCCCAAACCGGGCCCCTTTTTCATATATACGCATTTTACGCAGTAGTGTTTTCTTGGTTTTCCGCTGTACAAT
CAGGGCATGTGCCATAAATC

Product: nucleotidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLRLGIDIDGTITAQDTFVPYLNRSFNLSISLNDMTDYDLTKLLNITQEEFWDWMNQNEAIIYKEALLAQHAKQSLDLLK
EEHKLIYITARRTHLTDITYEWFDRQNIHYDHIELVGGHHKVEAVKNHNIDLFFEDHHGNAMMIAKEAGIPVILFNSPYN
QLPIDSNIIRVNNWLEAVQWMNNNKHHLIRVNN

Sequences:

>Translated_193_residues
MLRLGIDIDGTITAQDTFVPYLNRSFNLSISLNDMTDYDLTKLLNITQEEFWDWMNQNEAIIYKEALLAQHAKQSLDLLK
EEHKLIYITARRTHLTDITYEWFDRQNIHYDHIELVGGHHKVEAVKNHNIDLFFEDHHGNAMMIAKEAGIPVILFNSPYN
QLPIDSNIIRVNNWLEAVQWMNNNKHHLIRVNN
>Mature_193_residues
MLRLGIDIDGTITAQDTFVPYLNRSFNLSISLNDMTDYDLTKLLNITQEEFWDWMNQNEAIIYKEALLAQHAKQSLDLLK
EEHKLIYITARRTHLTDITYEWFDRQNIHYDHIELVGGHHKVEAVKNHNIDLFFEDHHGNAMMIAKEAGIPVILFNSPYN
QLPIDSNIIRVNNWLEAVQWMNNNKHHLIRVNN

Specific function: Unknown

COG id: COG5663

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'(3')-deoxyribonucleotidase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQFW_BACSU (P54480)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A69955
- RefSeq:   NP_390388.1
- ProteinModelPortal:   P54480
- EnsemblBacteria:   EBBACT00000000696
- GeneID:   937915
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25090
- NMPDR:   fig|224308.1.peg.2513
- GenoList:   BSU25090
- GeneTree:   EBGT00050000002410
- HOGENOM:   HBG498617
- OMA:   LFDTPYN
- ProtClustDB:   CLSK873010
- BioCyc:   BSUB:BSU25090-MONOMER
- InterPro:   IPR023214
- InterPro:   IPR009206
- Gene3D:   G3DSA:3.40.50.1000
- PIRSF:   PIRSF021362

Pfam domain/function: SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 22748; Mature: 22748

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLGIDIDGTITAQDTFVPYLNRSFNLSISLNDMTDYDLTKLLNITQEEFWDWMNQNEA
CEEEECCCCCEEEECCCEECCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCCE
IIYKEALLAQHAKQSLDLLKEEHKLIYITARRTHLTDITYEWFDRQNIHYDHIELVGGHH
EEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEECCCCCCCCCCEEEEECCCE
KVEAVKNHNIDLFFEDHHGNAMMIAKEAGIPVILFNSPYNQLPIDSNIIRVNNWLEAVQW
EEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHH
MNNNKHHLIRVNN
HCCCCEEEEEECC
>Mature Secondary Structure
MLRLGIDIDGTITAQDTFVPYLNRSFNLSISLNDMTDYDLTKLLNITQEEFWDWMNQNEA
CEEEECCCCCEEEECCCEECCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCCE
IIYKEALLAQHAKQSLDLLKEEHKLIYITARRTHLTDITYEWFDRQNIHYDHIELVGGHH
EEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEECCCCCCCCCCEEEEECCCE
KVEAVKNHNIDLFFEDHHGNAMMIAKEAGIPVILFNSPYNQLPIDSNIIRVNNWLEAVQW
EEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHH
MNNNKHHLIRVNN
HCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377