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The map label for this gene is yqjZ

Identifier: 16079425

GI number: 16079425

Start: 2463217

End: 2463561

Strand: Reverse

Name: yqjZ

Synonym: BSU23680

Alternate gene names: 16079425

Gene position: 2463561-2463217 (Counterclockwise)

Preceding gene: 16079426

Following gene: 16079424

Centisome position: 58.44

GC content: 46.38

Gene sequence:

>345_bases
ATGATGGATTTTTTATCAAAAACACCTGAGCCTCCTTACTATGCAGTCATTTTTTCTTCTGTCAAAAGCGAAAATGACAC
AGGATATGGAGAAACAGCGGAGCGGATGGTATCACTTGCGGCGGATCAGCCTGGATTTTTAGGCGTGGAAAGCGTACGTG
AAGCGGATGGAAGGGGCATCACAGTTTCCTATTGGGACAGTATGGACGCAATTAACCATTGGAGGCATCACACTGAACAT
CAAGCAGCAAAAGAAAAAGGAAGAAGCGTTTGGTACGAGTCGTATGCAGTCCGCGTCGCAAAAGTCGACAGACAGCGGCT
GTTTCAGGAGAACACGAATGATTGA

Upstream 100 bases:

>100_bases
AAAGGGCACCAAAACGGTAAATGGCATCTCAGTGTTTGCAAACTATGATGGCCCGGGCCAAGACAGGGTACTATTTGTCA
AAAACATATGAGGGGGAAAT

Downstream 100 bases:

>100_bases
ATTTCTCCAGCATAAGGAAGCCACTATAGCGCGTGAGATTTTAGCCGTACAGATCCCCGCCTACATAAAGGAAACAGAGA
TTATCGGTTTTGACGGTATT

Product: degradation enzyme (oxygenase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MMDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGITVSYWDSMDAINHWRHHTEH
QAAKEKGRSVWYESYAVRVAKVDRQRLFQENTND

Sequences:

>Translated_114_residues
MMDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGITVSYWDSMDAINHWRHHTEH
QAAKEKGRSVWYESYAVRVAKVDRQRLFQENTND
>Mature_114_residues
MMDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGITVSYWDSMDAINHWRHHTEH
QAAKEKGRSVWYESYAVRVAKVDRQRLFQENTND

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJZ_BACSU (P54563)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   B69966
- RefSeq:   NP_390249.1
- PDB:   2GO8
- PDBsum:   2GO8
- ProteinModelPortal:   P54563
- SMR:   P54563
- EnsemblBacteria:   EBBACT00000002832
- GeneID:   938708
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23680
- NMPDR:   fig|224308.1.peg.2373
- GenoList:   BSU23680
- GeneTree:   EBGT00050000002958
- HOGENOM:   HBG309285
- OMA:   KVERDYG
- ProtClustDB:   CLSK887530
- BioCyc:   BSUB:BSU23680-MONOMER
- GO:   GO:0005737
- InterPro:   IPR007138
- InterPro:   IPR011008

Pfam domain/function: PF03992 ABM; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 13048; Mature: 13048

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGI
CCCCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCE
TVSYWDSMDAINHWRHHTEHQAAKEKGRSVWYESYAVRVAKVDRQRLFQENTND
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGI
CCCCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCE
TVSYWDSMDAINHWRHHTEHQAAKEKGRSVWYESYAVRVAKVDRQRLFQENTND
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377