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The map label for this gene is spoIIM

Identifier: 16079410

GI number: 16079410

Start: 2450403

End: 2451047

Strand: Reverse

Name: spoIIM

Synonym: BSU23530

Alternate gene names: 16079410

Gene position: 2451047-2450403 (Counterclockwise)

Preceding gene: 16079411

Following gene: 255767511

Centisome position: 58.14

GC content: 40.62

Gene sequence:

>645_bases
ATGCGAAAAATCTCTTATAAGGACATGTTTCTCAGGCATGTCAAAGATCATCTCTCTCTTTATATATTTGTGTCAGTGCT
GTTTTTCATGGGTGTCATCTTTGGCGCGATTATTGTCAACAGTATGACCATCAGCCAGAAAGAAGATTTATACTACTACT
TAAGTCAATTTTTTGGACAGCTTTCGGATGGAAAACAGGCAAGTTCAGCTGATATGTTTGGGCAAAGTATCTTTCATAAT
GCAAAGTATTTAGGCCTGATGTGGATACTGGGAATTTCCGTCATTGGGATGCCGATTATTTTCATTATGATCTTTCTGAA
AGGGATCGTCGTCGGCTTTACTGTCGGGTTCCTAGTCAATCAGATGGGAGTAAGCGGGTTTTTCCTATCATTTGTCTCCG
TTTTGCCGCAAAATGTGCTGCTGATTCCGGCTTATCTCATTATGGGCACATGTGCAATTGCGTTTTCTTTAAAGTTAATC
AGACAGCTGTTCGTGAAACGAAGCCTGCATGACGCGCCGATTCAATGGTTCGGGCGGTATGCCTTTGTGCTGCTGGTCAT
TCTGTTTTTAGCGCTGATTTCATCTCTCTTTGAAGCATACTTATCTCCTGTTTTAATGGAAAAGCTTACATCTAGACTTT
TTTAA

Upstream 100 bases:

>100_bases
CATTCATCTCTATTGTTTCTTTTTGAAAAAGGGCATGTTTTTCTGTTTCTTTCATACAATCTATTAAATCAAATCACTAG
AGCGGGCGGGAGGAAACGGT

Downstream 100 bases:

>100_bases
AATCATTATTAAAAGAAAACCATTTTATTTATCAGTTTATAATAATTATAGTTGGAACTCTGCGCGTATTTTGTTATAAT
GAGTCATGGAATGCGGCGTA

Product: stage II sporulation autolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDLYYYLSQFFGQLSDGKQASSADMFGQSIFHN
AKYLGLMWILGISVIGMPIIFIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGTCAIAFSLKLI
RQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAYLSPVLMEKLTSRLF

Sequences:

>Translated_214_residues
MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDLYYYLSQFFGQLSDGKQASSADMFGQSIFHN
AKYLGLMWILGISVIGMPIIFIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGTCAIAFSLKLI
RQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAYLSPVLMEKLTSRLF
>Mature_214_residues
MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDLYYYLSQFFGQLSDGKQASSADMFGQSIFHN
AKYLGLMWILGISVIGMPIIFIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGTCAIAFSLKLI
RQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAYLSPVLMEKLTSRLF

Specific function: Required for complete septum migration and engulfment of the forespore compartment during sporulation

COG id: COG1300

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SP2M_BACSU (P37873)

Other databases:

- EMBL:   L06664
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A47581
- RefSeq:   NP_390234.1
- ProteinModelPortal:   P37873
- EnsemblBacteria:   EBBACT00000003348
- GeneID:   938723
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23530
- NMPDR:   fig|224308.1.peg.2358
- GenoList:   BSU23530
- GeneTree:   EBGT00050000001576
- HOGENOM:   HBG562976
- OMA:   GFLVNQM
- ProtClustDB:   CLSK2460932
- BioCyc:   BSUB:BSU23530-MONOMER
- InterPro:   IPR002798
- InterPro:   IPR014196
- TIGRFAMs:   TIGR02831

Pfam domain/function: PF01944 DUF95

EC number: NA

Molecular weight: Translated: 24297; Mature: 24297

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDLYYYLSQFFGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSDGKQASSADMFGQSIFHNAKYLGLMWILGISVIGMPIIFIMIFLKGIVVGFTVGFLVN
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMGVSGFFLSFVSVLPQNVLLIPAYLIMGTCAIAFSLKLIRQLFVKRSLHDAPIQWFGRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AFVLLVILFLALISSLFEAYLSPVLMEKLTSRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDLYYYLSQFFGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSDGKQASSADMFGQSIFHNAKYLGLMWILGISVIGMPIIFIMIFLKGIVVGFTVGFLVN
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMGVSGFFLSFVSVLPQNVLLIPAYLIMGTCAIAFSLKLIRQLFVKRSLHDAPIQWFGRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AFVLLVILFLALISSLFEAYLSPVLMEKLTSRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501064; 8969508; 9384377