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The map label for this gene is scpA

Identifier: 16079379

GI number: 16079379

Start: 2425831

End: 2426586

Strand: Reverse

Name: scpA

Synonym: BSU23220

Alternate gene names: 16079379

Gene position: 2426586-2425831 (Counterclockwise)

Preceding gene: 16079381

Following gene: 16079378

Centisome position: 57.56

GC content: 40.34

Gene sequence:

>756_bases
ATGGAAGAATATCAAGTGAAAATTGATACGTTTGAGGGCCCATTGGACCTGCTGCTTCATTTAATCAATCGTCTTGAAAT
TGACATATATGATATACCTGTGGCGAAGATCACTGAACAATATTTATTATATGTACATACGATGCGCGTGCTTGAGCTCG
ACATTGCCAGCGAGTATTTGGTTATGGCTGCCACGCTGCTCAGCATTAAAAGCAGAATGCTGCTCCCGAAGCAAGAGGAG
GAGCTTTTTGAAGATGAATTACTTGAAGAAGAAGATCCGCGGGAGGAACTGATTGAAAAGCTGATTGAGTACCGAAAATA
TAAAGATGCGGCGAAGGATTTAAAAGAACGGGAAGAAGAAAGACAAAAATCGTTCACGAAACCGCCGAGTGATTTGAGTG
AATATGCAAAAGAAGTAAAACAGTCTGAGCAAAAGCTCTCTGTCACGGTCTATGATATGATCGGAGCTTTTCAAAAAGTG
CTGAAACGCAAAAAAATAAACAGGCCGATGGAAACAACAATTACAAGACAGGACATACCAATCGAAGCCAGAATGAACGA
AATCGTGCACAGCTTGAAATCTAGAGGAACGAGAATTAACTTTATGGATCTGTTTCCATATGAGCAAAAAGAACATTTAG
TAGTGACCTTTCTAGCTGTTCTTGAGCTGATGAAAAATCAGCTGGTCCTCATTGAACAGGAGCACAATTTTTCAGATATT
TACATTACGGGGAGTGAATCCATTCATGGGGCTTGA

Upstream 100 bases:

>100_bases
AGGATATGAAATAGTATTGGACGAGAGCTTTTTGGTGGCTTATACTATAGGGTAGCCAGTTTTTCCGGCAATGAGAGTGA
TACTTGAAAATGGTGAGATG

Downstream 100 bases:

>100_bases
TATCGTGAATTGGAAAGCTATTGTGGAAGCCCTTCTTTATGCGGCAGGCGATGAAGGGCTTACAAAAAAGCAGCTGTTAA
CAGTGCTTGAAATCGAAGAG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MEEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRVLELDIASEYLVMAATLLSIKSRMLLPKQEE
ELFEDELLEEEDPREELIEKLIEYRKYKDAAKDLKEREEERQKSFTKPPSDLSEYAKEVKQSEQKLSVTVYDMIGAFQKV
LKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFPYEQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDI
YITGSESIHGA

Sequences:

>Translated_251_residues
MEEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRVLELDIASEYLVMAATLLSIKSRMLLPKQEE
ELFEDELLEEEDPREELIEKLIEYRKYKDAAKDLKEREEERQKSFTKPPSDLSEYAKEVKQSEQKLSVTVYDMIGAFQKV
LKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFPYEQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDI
YITGSESIHGA
>Mature_251_residues
MEEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRVLELDIASEYLVMAATLLSIKSRMLLPKQEE
ELFEDELLEEEDPREELIEKLIEYRKYKDAAKDLKEREEERQKSFTKPPSDLSEYAKEVKQSEQKLSVTVYDMIGAFQKV
LKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRINFMDLFPYEQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDI
YITGSESIHGA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_BACSU (P35154)

Other databases:

- EMBL:   L09228
- EMBL:   AL009126
- PIR:   S45549
- RefSeq:   NP_390203.1
- ProteinModelPortal:   P35154
- IntAct:   P35154
- EnsemblBacteria:   EBBACT00000001887
- GeneID:   938950
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23220
- NMPDR:   fig|224308.1.peg.2326
- GenoList:   BSU23220
- GeneTree:   EBGT00050000002600
- HOGENOM:   HBG728383
- OMA:   IRKQNID
- ProtClustDB:   PRK00104
- BioCyc:   BSUB:BSU23220-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29613; Mature: 29613

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRVLELDIASEYL
CCCEEEEEECCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLSIKSRMLLPKQEEELFEDELLEEEDPREELIEKLIEYRKYKDAAKDLKEREEE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKSFTKPPSDLSEYAKEVKQSEQKLSVTVYDMIGAFQKVLKRKKINRPMETTITRQDIP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
IEARMNEIVHSLKSRGTRINFMDLFPYEQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDI
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEE
YITGSESIHGA
EEECCCCCCCC
>Mature Secondary Structure
MEEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRVLELDIASEYL
CCCEEEEEECCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLSIKSRMLLPKQEEELFEDELLEEEDPREELIEKLIEYRKYKDAAKDLKEREEE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKSFTKPPSDLSEYAKEVKQSEQKLSVTVYDMIGAFQKVLKRKKINRPMETTITRQDIP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
IEARMNEIVHSLKSRGTRINFMDLFPYEQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDI
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEE
YITGSESIHGA
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377