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The map label for this gene is qcrC

Identifier: 16079311

GI number: 16079311

Start: 2363111

End: 2363878

Strand: Reverse

Name: qcrC

Synonym: BSU22540

Alternate gene names: 16079311

Gene position: 2363878-2363111 (Counterclockwise)

Preceding gene: 16079312

Following gene: 16079310

Centisome position: 56.07

GC content: 47.92

Gene sequence:

>768_bases
ATGCACCGGGGCAAAGGGATGAAATTTGTAGGCGACTCAAGGATACCGGCTGAAAAAAAGCCGAATATACCGAAGGATTA
TTCGGAGTATCCGGGTAAAACAGAGGCTTTCTGGCCAAATTTCTTGTTAAAGGAATGGATGGTTGGAGCTGTCTTTCTCA
TCGGTTTTCTCGTTTTGACGATTGTGCATCAGCCGCCTTTAGAGCGGATGGCGGACCCGACTGATACTGGTTATATTCCG
CTGCCGGATTGGTATTTTCTTTTCTTATACCAGCTGTTGAAGTATGAATACGCCGCCGGAAGCTTTACAGTGGTCGGCGC
CATGATTATGCCAGGTCTCGCTTTTGGGGCCCTGCTTTTGGCTCCATTCCTAGACAGAGGGACAGAAAGAAGGCCGTGGA
AGCGTCCGGTCGCTGTCGGTATGATGCTTCTGGCCATTTCCGCTGCTGTATTTTTGACGTGGCAGTCAGTTGCTACTCAT
GACTGGGCCAAGGCAGAAGAACAGGGGAAAATTACAAAAGAAGCCGACATTGACACCAATGCAGAAGGATATAAGGTTTT
TAAGGAACAGGGCTGTATTTCTTGCCATGGGGATAACCTTCAGGGAGGAGCGGCCGGGCCTTCATTGGTTGACAGCGGGC
TGAAACCGGATGAAATCAAAAAAATCGCTGTAGAAGGGAAAGGCAAAATGCCGGCGGGTGTGTTCAAAGGAAATGATAAG
CAGCTCGAAGAACTTGCAAAATTTATTTCTGAAACAACCGCAAAATAA

Upstream 100 bases:

>100_bases
TTGTTCGGGCTGATGGCTGCACATTTTATTATGATCCGGAAGCAGGGGATTTCAGGACCGCTTTAAACTCTTGATCTGCG
AATAAAAGGGAGGGGATGAC

Downstream 100 bases:

>100_bases
CGTATTGTGAATTGTCAAATGGAAGGATATACTTTTATTATCAAAAGCTGACCCGGCGTCAGCTTTTTTATATGGACATA
TTATTTTTACAGACTGAGAG

Product: menaquinol:cytochrome c oxidoreductase cytochrome cc subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLIGFLVLTIVHQPPLERMADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGSFTVVGAMIMPGLAFGALLLAPFLDRGTERRPWKRPVAVGMMLLAISAAVFLTWQSVATH
DWAKAEEQGKITKEADIDTNAEGYKVFKEQGCISCHGDNLQGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDK
QLEELAKFISETTAK

Sequences:

>Translated_255_residues
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLIGFLVLTIVHQPPLERMADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGSFTVVGAMIMPGLAFGALLLAPFLDRGTERRPWKRPVAVGMMLLAISAAVFLTWQSVATH
DWAKAEEQGKITKEADIDTNAEGYKVFKEQGCISCHGDNLQGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDK
QLEELAKFISETTAK
>Mature_255_residues
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLIGFLVLTIVHQPPLERMADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGSFTVVGAMIMPGLAFGALLLAPFLDRGTERRPWKRPVAVGMMLLAISAAVFLTWQSVATH
DWAKAEEQGKITKEADIDTNAEGYKVFKEQGCISCHGDNLQGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDK
QLEELAKFISETTAK

Specific function: Component of the menaquinol-cytochrome c reductase complex

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QCRC_BACSU (P46913)

Other databases:

- EMBL:   U25535
- EMBL:   L47709
- EMBL:   AL009126
- PIR:   D69687
- RefSeq:   NP_390135.1
- ProteinModelPortal:   P46913
- EnsemblBacteria:   EBBACT00000001467
- GeneID:   939021
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22540
- NMPDR:   fig|224308.1.peg.2258
- GenoList:   BSU22540
- GeneTree:   EBGT00050000001228
- HOGENOM:   HBG313420
- OMA:   RRPWKRP
- ProtClustDB:   CLSK873095
- BioCyc:   BSUB:BSU22540-MONOMER
- GO:   GO:0006810
- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR012049
- Gene3D:   G3DSA:1.20.810.10
- Gene3D:   G3DSA:1.10.760.10
- PIRSF:   PIRSF036636

Pfam domain/function: PF00032 Cytochrom_B_C; PF00034 Cytochrom_C; SSF81648 Cytochrome_b/b6_C; SSF46626 Cytochrome_c

EC number: 1.10.2.-

Molecular weight: Translated: 28162; Mature: 28162

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS51003 CYTB_CTER; PS51007 CYTC

Important sites: BINDING 192-192 BINDING 195-195

Signals:

None

Transmembrane regions:

HASH(0x1041db40)-; HASH(0xef7824c)-; HASH(0xfabc660)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLIGFLVLT
CCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVHQPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAGSFTVVGAMIMPGLAFGALLL
HHCCCCHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGTERRPWKRPVAVGMMLLAISAAVFLTWQSVATHDWAKAEEQGKITKEADIDTN
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AEGYKVFKEQGCISCHGDNLQGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDK
CHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHH
QLEELAKFISETTAK
HHHHHHHHHHHHCCH
>Mature Secondary Structure
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLIGFLVLT
CCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVHQPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAGSFTVVGAMIMPGLAFGALLL
HHCCCCHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGTERRPWKRPVAVGMMLLAISAAVFLTWQSVATHDWAKAEEQGKITKEADIDTN
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AEGYKVFKEQGCISCHGDNLQGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDK
CHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHH
QLEELAKFISETTAK
HHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377