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The map label for this gene is yonF

Identifier: 16079170

GI number: 16079170

Start: 2230895

End: 2232664

Strand: Direct

Name: yonF

Synonym: BSU21110

Alternate gene names: 16079170

Gene position: 2230895-2232664 (Clockwise)

Preceding gene: 16079169

Following gene: 16079171

Centisome position: 52.92

GC content: 36.38

Gene sequence:

>1770_bases
ATGACCTCACATAAAAATTTTACAACAGATCGCAACAAGCACAGTCGAGGAATCAATATTTTTAAAAAGGGAAACAACTT
TAAAAAGAAATCAAAATCTGAAAGATTAATGGATGGTATCGGCGCATGGACTTCTTTCTATAGAGCAAACCCACATCGTT
TTGTAAAAGAATACTTGGGTATTACACTTAAATTGTTTCAATGTATTTTAATTTACATGATGGTACATAACCATTATTTT
ATGTACCTGGCCAGTCGTGGGCAGGGTAAAACTTGGCTAACCTCTGTATACTGCTGTGTGCAAGCCATACTCTTCCCAGG
TACTAAAATAGTTATCGCATCGGGCACAAAGGGACAAGCTCGTGAAGTCATAGAGAAAATTGATGACTTACGCAAAGAAT
CACCTAATTTAAGGCGAGAAATTGAAGATTTAAAAACCTCAACAAATGATGCTAAAGTGGAGTTTCATAATGGCAGCTGG
ATTAAAATCGTAGCCTCAAATGATGGCGCCCGCTCCAAGCGTGCAAACCTCCTTATTGTAGATGAATTCAGAATGGTTGA
TTTTGAAATCATCAGTAAAGTACTTCGAAAATTCCTGACAGCTCCCCGTTCTCCTAAATATCTCGAAAAAGAAGAATACG
CTCACTTAAAAGAACGAAACAAAGAAATTTACTTGTCTTCCTGCTGGTACAAGGTTCATTGGTCATTTAACAGATTCATA
ACTTACTACAATGCCATGATGAAAGGATCAAAATATTTTGTGTGTGGTCTCCCTTATCAGATCGCAATTAAAGAAGGTCT
TTTGGATAAAGATCAGGTTAGAGATGAAATGGCCGAAGAAGACTTTGATCCTATCGGTTGGTCTATGGAAATGGAAGCTC
TCTGGTTTGGTGAATCTGAAAAAGCCTATTTTAAATTCGAAGACATTGAAAAGAACCGCAAGCTTGCTTCTCCCCTCTTC
CCTCCTGACTATTACAGTCTAATCAAGGATTCCAACTTCAAATATGAAGGCAAGAAACCAGGAGAAATTAGACTGGTAAG
CAATGATATCGCTGGAATGGCCGGTAAGGATAATGATGCCAGTGTTTACACTGTATTCAGACTGATTCCAAACTCCAATG
GATATGATCGTCATATTGTATACATGGAGAGCATCGTAGGTGGTCACACAGGAACTCAAGCAACAAGAATTAGACAAATA
TACGAAGATTATGATTGCGATTATATTGTATTAGATACTCAAAGTATCGGACTTGGTGTGTATGATGCATTATGCCAGCC
TTTATATGATAAAGAACGTGCAAAAGAATATGAGCCATTTTCATGTATTAACGATGAAAGAATGGCTGCGCGTTGTACTT
ATCAAAATGCTGAAAAAGTAATTTATAGCATTAAAGGTAATGCACAATTGAACAGCGAAATTGCGGTATTACTAAAAGAT
GGATTCAAACGAGGAAAAATCAAAATTCCTATCAACGAAAATGAAGGAAAAGAATACCTGAAAAGATTTAAAGGCTATGA
AGGGCTATCTCCTGAAGTTAAAGGAAAATTCCTTTCAAGCTATGCTCAGATTACCCTTCTAATAAATGAAATGATCAACT
TAGAAGCTGAATATAGCGATAACGGACAAGTTAAGCTTAAAGAGCCAAAGAGTAAACGAAAAGACAGATATAGCTCAGTG
GCTTATGGCAACTATATTGCTACTGTATTAGAAAGACAGTTAAACAAACAAACTGAATATGACGTTGAAGATGAATTAGT
CTATTTTTAA

Upstream 100 bases:

>100_bases
CGAATGCTTGGTTTGAAAAATCAATATTCAGAGGAATATTGGGAAGAAATGAATAAGCATACTGTTGAAGAACCTGTTGC
AGAAGAAGAGGATCGAGAAA

Downstream 100 bases:

>100_bases
AAGAAATGAGGTGAAACATGGTAACCTTAAATAAAGTTGACATTGAGTCTGAAGAGTATAAGCAAATGCTGAATGACTAT
TCAACTTATACTTCTACATT

Product: prophage terminase, ATP subunit; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTSHKNFTTDRNKHSRGINIFKKGNNFKKKSKSERLMDGIGAWTSFYRANPHRFVKEYLGITLKLFQCILIYMMVHNHYF
MYLASRGQGKTWLTSVYCCVQAILFPGTKIVIASGTKGQAREVIEKIDDLRKESPNLRREIEDLKTSTNDAKVEFHNGSW
IKIVASNDGARSKRANLLIVDEFRMVDFEIISKVLRKFLTAPRSPKYLEKEEYAHLKERNKEIYLSSCWYKVHWSFNRFI
TYYNAMMKGSKYFVCGLPYQIAIKEGLLDKDQVRDEMAEEDFDPIGWSMEMEALWFGESEKAYFKFEDIEKNRKLASPLF
PPDYYSLIKDSNFKYEGKKPGEIRLVSNDIAGMAGKDNDASVYTVFRLIPNSNGYDRHIVYMESIVGGHTGTQATRIRQI
YEDYDCDYIVLDTQSIGLGVYDALCQPLYDKERAKEYEPFSCINDERMAARCTYQNAEKVIYSIKGNAQLNSEIAVLLKD
GFKRGKIKIPINENEGKEYLKRFKGYEGLSPEVKGKFLSSYAQITLLINEMINLEAEYSDNGQVKLKEPKSKRKDRYSSV
AYGNYIATVLERQLNKQTEYDVEDELVYF

Sequences:

>Translated_589_residues
MTSHKNFTTDRNKHSRGINIFKKGNNFKKKSKSERLMDGIGAWTSFYRANPHRFVKEYLGITLKLFQCILIYMMVHNHYF
MYLASRGQGKTWLTSVYCCVQAILFPGTKIVIASGTKGQAREVIEKIDDLRKESPNLRREIEDLKTSTNDAKVEFHNGSW
IKIVASNDGARSKRANLLIVDEFRMVDFEIISKVLRKFLTAPRSPKYLEKEEYAHLKERNKEIYLSSCWYKVHWSFNRFI
TYYNAMMKGSKYFVCGLPYQIAIKEGLLDKDQVRDEMAEEDFDPIGWSMEMEALWFGESEKAYFKFEDIEKNRKLASPLF
PPDYYSLIKDSNFKYEGKKPGEIRLVSNDIAGMAGKDNDASVYTVFRLIPNSNGYDRHIVYMESIVGGHTGTQATRIRQI
YEDYDCDYIVLDTQSIGLGVYDALCQPLYDKERAKEYEPFSCINDERMAARCTYQNAEKVIYSIKGNAQLNSEIAVLLKD
GFKRGKIKIPINENEGKEYLKRFKGYEGLSPEVKGKFLSSYAQITLLINEMINLEAEYSDNGQVKLKEPKSKRKDRYSSV
AYGNYIATVLERQLNKQTEYDVEDELVYF
>Mature_588_residues
TSHKNFTTDRNKHSRGINIFKKGNNFKKKSKSERLMDGIGAWTSFYRANPHRFVKEYLGITLKLFQCILIYMMVHNHYFM
YLASRGQGKTWLTSVYCCVQAILFPGTKIVIASGTKGQAREVIEKIDDLRKESPNLRREIEDLKTSTNDAKVEFHNGSWI
KIVASNDGARSKRANLLIVDEFRMVDFEIISKVLRKFLTAPRSPKYLEKEEYAHLKERNKEIYLSSCWYKVHWSFNRFIT
YYNAMMKGSKYFVCGLPYQIAIKEGLLDKDQVRDEMAEEDFDPIGWSMEMEALWFGESEKAYFKFEDIEKNRKLASPLFP
PDYYSLIKDSNFKYEGKKPGEIRLVSNDIAGMAGKDNDASVYTVFRLIPNSNGYDRHIVYMESIVGGHTGTQATRIRQIY
EDYDCDYIVLDTQSIGLGVYDALCQPLYDKERAKEYEPFSCINDERMAARCTYQNAEKVIYSIKGNAQLNSEIAVLLKDG
FKRGKIKIPINENEGKEYLKRFKGYEGLSPEVKGKFLSSYAQITLLINEMINLEAEYSDNGQVKLKEPKSKRKDRYSSVA
YGNYIATVLERQLNKQTEYDVEDELVYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YONF_BACSU (O31952)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389994.1
- ProteinModelPortal:   O31952
- SMR:   O31952
- EnsemblBacteria:   EBBACT00000002318
- GeneID:   939161
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21110
- NMPDR:   fig|224308.1.peg.2117
- GenoList:   BSU21110
- HOGENOM:   HBG218167
- OMA:   FHNGSWI
- ProtClustDB:   CLSK254640
- BioCyc:   BSUB:BSU21110-MONOMER
- InterPro:   IPR004921

Pfam domain/function: PF03237 Terminase_6

EC number: NA

Molecular weight: Translated: 68397; Mature: 68266

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSHKNFTTDRNKHSRGINIFKKGNNFKKKSKSERLMDGIGAWTSFYRANPHRFVKEYLG
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ITLKLFQCILIYMMVHNHYFMYLASRGQGKTWLTSVYCCVQAILFPGTKIVIASGTKGQA
HHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHH
REVIEKIDDLRKESPNLRREIEDLKTSTNDAKVEFHNGSWIKIVASNDGARSKRANLLIV
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEE
DEFRMVDFEIISKVLRKFLTAPRSPKYLEKEEYAHLKERNKEIYLSSCWYKVHWSFNRFI
ECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEEECHHHHH
TYYNAMMKGSKYFVCGLPYQIAIKEGLLDKDQVRDEMAEEDFDPIGWSMEMEALWFGESE
HHHHHHHCCCEEEEECCCCEEEHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
KAYFKFEDIEKNRKLASPLFPPDYYSLIKDSNFKYEGKKPGEIRLVSNDIAGMAGKDNDA
CEEEEEHHHHCCCHHCCCCCCCHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCCC
SVYTVFRLIPNSNGYDRHIVYMESIVGGHTGTQATRIRQIYEDYDCDYIVLDTQSIGLGV
EEEEEEEEECCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHH
YDALCQPLYDKERAKEYEPFSCINDERMAARCTYQNAEKVIYSIKGNAQLNSEIAVLLKD
HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEECCHHEEEECC
GFKRGKIKIPINENEGKEYLKRFKGYEGLSPEVKGKFLSSYAQITLLINEMINLEAEYSD
CCCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
NGQVKLKEPKSKRKDRYSSVAYGNYIATVLERQLNKQTEYDVEDELVYF
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
>Mature Secondary Structure 
TSHKNFTTDRNKHSRGINIFKKGNNFKKKSKSERLMDGIGAWTSFYRANPHRFVKEYLG
CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ITLKLFQCILIYMMVHNHYFMYLASRGQGKTWLTSVYCCVQAILFPGTKIVIASGTKGQA
HHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHH
REVIEKIDDLRKESPNLRREIEDLKTSTNDAKVEFHNGSWIKIVASNDGARSKRANLLIV
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEE
DEFRMVDFEIISKVLRKFLTAPRSPKYLEKEEYAHLKERNKEIYLSSCWYKVHWSFNRFI
ECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEEECHHHHH
TYYNAMMKGSKYFVCGLPYQIAIKEGLLDKDQVRDEMAEEDFDPIGWSMEMEALWFGESE
HHHHHHHCCCEEEEECCCCEEEHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
KAYFKFEDIEKNRKLASPLFPPDYYSLIKDSNFKYEGKKPGEIRLVSNDIAGMAGKDNDA
CEEEEEHHHHCCCHHCCCCCCCHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCCC
SVYTVFRLIPNSNGYDRHIVYMESIVGGHTGTQATRIRQIYEDYDCDYIVLDTQSIGLGV
EEEEEEEEECCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHH
YDALCQPLYDKERAKEYEPFSCINDERMAARCTYQNAEKVIYSIKGNAQLNSEIAVLLKD
HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEECCHHEEEECC
GFKRGKIKIPINENEGKEYLKRFKGYEGLSPEVKGKFLSSYAQITLLINEMINLEAEYSD
CCCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
NGQVKLKEPKSKRKDRYSSVAYGNYIATVLERQLNKQTEYDVEDELVYF
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377