Click here to switch to the map view.

The map label for this gene is yonH

Identifier: 16079168

GI number: 16079168

Start: 2229385

End: 2229885

Strand: Direct

Name: yonH

Synonym: BSU21090

Alternate gene names: 16079168

Gene position: 2229385-2229885 (Clockwise)

Preceding gene: 255767470

Following gene: 16079169

Centisome position: 52.88

GC content: 32.73

Gene sequence:

>501_bases
ATGACGAATGAAGACTTTAAATATCTGAATAAGCACTTAGAAACACTTGCCCAACTCAAGCAGTCTGGATACAAATGTGA
TAAAGAGATATCTACTGTTATTAGTAAATTACATAAACTAATGGGACTTGCATCAAAATCAAAAGTTAATTTTTACACTT
TAGGTAGCAATGTTGAAAACGAAAACATTGCTGATTATAAAATAGGCGTAGATTCTCCAAAAGGAAATAGGTTGTTAATC
GTTGATCCCCGGACAGATTGTACAACAGTTTTACTTGTTAATGTTAAAGACTCCAAATTTGAAAATATTAAAAGAAGAAT
AGCTTCTCAGACATTCGGATATCAAGCAGACCTATTGGTTCAGATTTTAAAAGAAAAACGCCCTGACAAACTGTTGATTG
ATACATGTGGAATTGGTAAAGGGTTAATGGACATGGTGATTGAAAAGTTAAAAACACAAGATATCGAAATGTCTCCCAGT
GGTGATTTGACCTATAGTTAA

Upstream 100 bases:

>100_bases
ATAAAACTTTAATTTTATTTAGATTGGAGTCGCATTAATGGTTGACTGCAAAAAGGTTTATTAAAGTAATACAAAAAAAC
GATTGAGGATGAAGAAGAAA

Downstream 100 bases:

>100_bases
GCACCTTTTTAGAACGCCCAGCGAAGATTGCGGTACTCCCCTTCCGCTCTATTGCTGGGCGTTTCGTAAAATGTGTTTAC
ATAAACTTTATGGAGGTGAA

Product: capsid protein; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTNEDFKYLNKHLETLAQLKQSGYKCDKEISTVISKLHKLMGLASKSKVNFYTLGSNVENENIADYKIGVDSPKGNRLLI
VDPRTDCTTVLLVNVKDSKFENIKRRIASQTFGYQADLLVQILKEKRPDKLLIDTCGIGKGLMDMVIEKLKTQDIEMSPS
GDLTYS

Sequences:

>Translated_166_residues
MTNEDFKYLNKHLETLAQLKQSGYKCDKEISTVISKLHKLMGLASKSKVNFYTLGSNVENENIADYKIGVDSPKGNRLLI
VDPRTDCTTVLLVNVKDSKFENIKRRIASQTFGYQADLLVQILKEKRPDKLLIDTCGIGKGLMDMVIEKLKTQDIEMSPS
GDLTYS
>Mature_165_residues
TNEDFKYLNKHLETLAQLKQSGYKCDKEISTVISKLHKLMGLASKSKVNFYTLGSNVENENIADYKIGVDSPKGNRLLIV
DPRTDCTTVLLVNVKDSKFENIKRRIASQTFGYQADLLVQILKEKRPDKLLIDTCGIGKGLMDMVIEKLKTQDIEMSPSG
DLTYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YONH_BACSU (O31950)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389992.1
- ProteinModelPortal:   O31950
- EnsemblBacteria:   EBBACT00000001785
- GeneID:   939160
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21090
- NMPDR:   fig|224308.1.peg.2115
- GenoList:   BSU21090
- BioCyc:   BSUB:BSU21090-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18708; Mature: 18577

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNEDFKYLNKHLETLAQLKQSGYKCDKEISTVISKLHKLMGLASKSKVNFYTLGSNVEN
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
ENIADYKIGVDSPKGNRLLIVDPRTDCTTVLLVNVKDSKFENIKRRIASQTFGYQADLLV
CCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
QILKEKRPDKLLIDTCGIGKGLMDMVIEKLKTQDIEMSPSGDLTYS
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNEDFKYLNKHLETLAQLKQSGYKCDKEISTVISKLHKLMGLASKSKVNFYTLGSNVEN
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
ENIADYKIGVDSPKGNRLLIVDPRTDCTTVLLVNVKDSKFENIKRRIASQTFGYQADLLV
CCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
QILKEKRPDKLLIDTCGIGKGLMDMVIEKLKTQDIEMSPSGDLTYS
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377