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The map label for this gene is yopH

Identifier: 16079148

GI number: 16079148

Start: 2211309

End: 2211845

Strand: Reverse

Name: yopH

Synonym: BSU20890

Alternate gene names: 16079148

Gene position: 2211845-2211309 (Counterclockwise)

Preceding gene: 16079149

Following gene: 16079147

Centisome position: 52.47

GC content: 32.96

Gene sequence:

>537_bases
ATGAGTGACCAAAATGAAAAAAGTCCTTCATGGGTAGGTGACATTATTAAGCTGAGCCCTAAATATTTATTGGGACTAGC
AGTTTTTTCTGGAATTGGGCTTTGGTTAGGGAATGTTGGATTAGGAAAAACACTTGGTATAAAAGATGCTATAAATAGCT
ATAAACTTTACCTAGGGCTTGTTTTCTTAGCATCAACCAGTTTCATTTTATCTCACTTTATTTGGTGGATAAGTTTGGGG
ATAAAAAATAAAATTGACCAAAAATACAGTTATAAACTGCAAAAAGAAAGACTCCGAAATCTTAATAGGAGGGAAAAACA
AATATTAAGCCCCTACATCTTTGACGATGTTCGGTCTGTGGAATTAAGTATAACTGATGGGACAGCTCAGGAATTAGAAC
ATTTAAAGATTATTTATAGAAGTTCTAATATTAGTAATCGTGGTTCTTATTTTGCATACAACATACAGCCTTGGGCGAGG
GGATATTTAACAAAAAACAAGCATTTATTACATGAGTCAATAGATCACATCTTATAA

Upstream 100 bases:

>100_bases
CTGCTATACTTGAAGACTTGTATCAGAAGCGGTTCGAGTATGTTGAATGGAAGCGGCTATAACATCTTCACTATTCTATA
AATATGAGGTGGTTGATTAT

Downstream 100 bases:

>100_bases
GACATACAGAAAGGAAATATTCAAATTTGAATAATATAGGAGAAATAATTTCTAATTTTGAAGGTATCATTGGGGCTTTA
TTGGGAGTTATAGTCACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSDQNEKSPSWVGDIIKLSPKYLLGLAVFSGIGLWLGNVGLGKTLGIKDAINSYKLYLGLVFLASTSFILSHFIWWISLG
IKNKIDQKYSYKLQKERLRNLNRREKQILSPYIFDDVRSVELSITDGTAQELEHLKIIYRSSNISNRGSYFAYNIQPWAR
GYLTKNKHLLHESIDHIL

Sequences:

>Translated_178_residues
MSDQNEKSPSWVGDIIKLSPKYLLGLAVFSGIGLWLGNVGLGKTLGIKDAINSYKLYLGLVFLASTSFILSHFIWWISLG
IKNKIDQKYSYKLQKERLRNLNRREKQILSPYIFDDVRSVELSITDGTAQELEHLKIIYRSSNISNRGSYFAYNIQPWAR
GYLTKNKHLLHESIDHIL
>Mature_177_residues
SDQNEKSPSWVGDIIKLSPKYLLGLAVFSGIGLWLGNVGLGKTLGIKDAINSYKLYLGLVFLASTSFILSHFIWWISLGI
KNKIDQKYSYKLQKERLRNLNRREKQILSPYIFDDVRSVELSITDGTAQELEHLKIIYRSSNISNRGSYFAYNIQPWARG
YLTKNKHLLHESIDHIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPH_BACSU (O31930)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389971.1
- EnsemblBacteria:   EBBACT00000002164
- GeneID:   939185
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20890
- NMPDR:   fig|224308.1.peg.2094
- GenoList:   BSU20890
- OMA:   YNIQPWA
- ProtClustDB:   CLSK252112
- BioCyc:   BSUB:BSU20890-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20478; Mature: 20347

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10204e04)-; HASH(0xfe53f60)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQNEKSPSWVGDIIKLSPKYLLGLAVFSGIGLWLGNVGLGKTLGIKDAINSYKLYLGL
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VFLASTSFILSHFIWWISLGIKNKIDQKYSYKLQKERLRNLNRREKQILSPYIFDDVRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCHHEE
ELSITDGTAQELEHLKIIYRSSNISNRGSYFAYNIQPWARGYLTKNKHLLHESIDHIL
EEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHCH
>Mature Secondary Structure 
SDQNEKSPSWVGDIIKLSPKYLLGLAVFSGIGLWLGNVGLGKTLGIKDAINSYKLYLGL
CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VFLASTSFILSHFIWWISLGIKNKIDQKYSYKLQKERLRNLNRREKQILSPYIFDDVRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCHHEE
ELSITDGTAQELEHLKIIYRSSNISNRGSYFAYNIQPWARGYLTKNKHLLHESIDHIL
EEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377