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The map label for this gene is yopJ

Identifier: 16079146

GI number: 16079146

Start: 2210331

End: 2210747

Strand: Reverse

Name: yopJ

Synonym: BSU20870

Alternate gene names: 16079146

Gene position: 2210747-2210331 (Counterclockwise)

Preceding gene: 16079147

Following gene: 16079145

Centisome position: 52.44

GC content: 36.21

Gene sequence:

>417_bases
ATGAAAAACACATTTTTATATTTTAGATGGGAAGACCTCCATGGTGAAATAGGTGTTGATTCCTTTAATTTATTGAGAGC
AAGTTATTCTAATTTGAGTGAACAGCAATTAGTAGAGTTAATTAAAGAGTTGATATCTATAGAGCGGGAGGATATCGCTG
CGAAATTTGATATACACCTATCTGAGAATGCCCCAGTTTTCGATGAACGGCAACATGTGGTTTATAAAGGCGTTGCCGGA
GATATGAACTACAAAGACATGTTGCTTTCTTTGGTAACGGCATTAGATTTGACTAATACACTTGACCATGTGCAGAATAT
CCTGTCCTTAGCTAAATGCTTAAGAAGTTTTGATAGAGAAATTTTCGCTAGGTTTGCAAAGGATATTGCGGAAGAGGTGT
ATTATAGCCTTAAGTAG

Upstream 100 bases:

>100_bases
GAAAAGGAAACTAAACAAGTGAAAAAATGCAATAGGGTTTATCTTGAGGCAAAAGATCATAACGGGAAAATGTACAAAGT
ATTCTTAGGGGAGTTTTAAA

Downstream 100 bases:

>100_bases
GACCTTTTGCTTTAGAAGAACACAATGAGGTTTAGTCCTCATTGTGTCTAGTTAAAATTGGAATTTTAAAGAGATTACAA
ATACAAAAAATATGTATAAA

Product: nucleotide binding protein; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKNTFLYFRWEDLHGEIGVDSFNLLRASYSNLSEQQLVELIKELISIEREDIAAKFDIHLSENAPVFDERQHVVYKGVAG
DMNYKDMLLSLVTALDLTNTLDHVQNILSLAKCLRSFDREIFARFAKDIAEEVYYSLK

Sequences:

>Translated_138_residues
MKNTFLYFRWEDLHGEIGVDSFNLLRASYSNLSEQQLVELIKELISIEREDIAAKFDIHLSENAPVFDERQHVVYKGVAG
DMNYKDMLLSLVTALDLTNTLDHVQNILSLAKCLRSFDREIFARFAKDIAEEVYYSLK
>Mature_138_residues
MKNTFLYFRWEDLHGEIGVDSFNLLRASYSNLSEQQLVELIKELISIEREDIAAKFDIHLSENAPVFDERQHVVYKGVAG
DMNYKDMLLSLVTALDLTNTLDHVQNILSLAKCLRSFDREIFARFAKDIAEEVYYSLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPJ_BACSU (O31928)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389969.1
- EnsemblBacteria:   EBBACT00000002710
- GeneID:   939184
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20870
- NMPDR:   fig|224308.1.peg.2092
- GenoList:   BSU20870
- BioCyc:   BSUB:BSU20870-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16023; Mature: 16023

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTFLYFRWEDLHGEIGVDSFNLLRASYSNLSEQQLVELIKELISIEREDIAAKFDIHL
CCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
SENAPVFDERQHVVYKGVAGDMNYKDMLLSLVTALDLTNTLDHVQNILSLAKCLRSFDRE
CCCCCCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFARFAKDIAEEVYYSLK
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNTFLYFRWEDLHGEIGVDSFNLLRASYSNLSEQQLVELIKELISIEREDIAAKFDIHL
CCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
SENAPVFDERQHVVYKGVAGDMNYKDMLLSLVTALDLTNTLDHVQNILSLAKCLRSFDRE
CCCCCCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFARFAKDIAEEVYYSLK
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377