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The map label for this gene is yopK

Identifier: 16079145

GI number: 16079145

Start: 2208994

End: 2210154

Strand: Reverse

Name: yopK

Synonym: BSU20860

Alternate gene names: 16079145

Gene position: 2210154-2208994 (Counterclockwise)

Preceding gene: 16079146

Following gene: 16079144

Centisome position: 52.43

GC content: 31.09

Gene sequence:

>1161_bases
ATGGAGTTAATAAGGATAGCTATGAAGAAAGACTTGGAAAATGACAACTCTTTAATGAATAAATGGGCAACAGTAGCTGG
CCTTAAAAACCCCAATCCTCTTTATGACTTCTTAAACCATGATGGGAAAACATTTAATGAATTTTCTTCAATAGTCAACA
TTGTTAAGAGTCAGTATCCAGACCGTGAATATGAATTAATGAAAGATTACTGTTTAAACCTAGATGTTAAGACAAAGGCA
GCAAGAAGTGCATTGGAGTATGCTGATGCAAATATGTTTTTTGAAATAGAAGATGTTTTAATAGATTCAATGATTTCTTG
CAGCAATATGAAAAGTAAAGAATATGGAAAAGTGTATAAAATACATAGAGAACTGTCTAACAGTGTTATTACTGAATTTG
AGGCAGTGAAAAGACTCGGCAAATTAAATATAAAAACACCTGAAATGAATTCTTTCTCAAGACTCTTGCTGCTTTATCAT
TATTTAAGCACTGGTAACTTTTCTCCGATGGCCCAACTTATAAAACAAATTGACCTAAGTGAGATTTCTGAGAACATGTA
CATTAGAAATACATATCAAACAAGAGTTCATGTTCTAATGTCTAATATAAAGTTAAATGAAAATTCATTAGAGGAGTGCA
GAGAGTACTCTAAAAAGGCATTGGAAAGTACAAATATCCTGAGATTTCAGGTTTTCAGCTACTTAACTATTGGCAACTCT
CTATTATTTTCGAATTATGAATTGGCTCAAGAAAACTTTTTAAAAGGGCTAAGCATTTCTGTTCAAAATGAAAATTACAA
CATGATTTTCCAGCAGGCTTTGTGCTTCTTAAATAATGTATGGCGCAAAGAAAATAAGTGGATTAATTTTGAATCTGATT
CAATTATGGATTTGCAGGAGCAAGCTCATTGTTTTATCAACTTTAATGAAAATTCCAAAGCAAAAGAAGTTTTGGATAAA
CTAGATCTTTTAGTTCACAACGATAATGAGCTTGCAATGCATTATTATTTGAAAGGAAGACTCGAACAAAATAAAGCATG
TTTCTATTCTTCAATCGAGTATTTTAAAAAGTCTAATGACAAATTCCTTATTAGGCTGCCACTGTTAGAACTGCAAAAGA
TGGGTGAAAATCAAAAACTTTTAGAATTACTTTTACTTTAA

Upstream 100 bases:

>100_bases
ACAAATACAAAAAATATGTATAAAATAATTGACTCGTAATGTGATCTATAGTATTATTAAGTTAACCAATAAAGACAACA
AAAAGAAATGAGGGGAAATA

Downstream 100 bases:

>100_bases
AGGAGGTGAGACAATGAAAAAACTTATTATGGCTTTAGTTATCTTGGGCGCACTAGGCACTTCTTACATAAGTGCAGATT
CTTCAATCCAACAAGCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MELIRIAMKKDLENDNSLMNKWATVAGLKNPNPLYDFLNHDGKTFNEFSSIVNIVKSQYPDREYELMKDYCLNLDVKTKA
ARSALEYADANMFFEIEDVLIDSMISCSNMKSKEYGKVYKIHRELSNSVITEFEAVKRLGKLNIKTPEMNSFSRLLLLYH
YLSTGNFSPMAQLIKQIDLSEISENMYIRNTYQTRVHVLMSNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNS
LLFSNYELAQENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINFESDSIMDLQEQAHCFINFNENSKAKEVLDK
LDLLVHNDNELAMHYYLKGRLEQNKACFYSSIEYFKKSNDKFLIRLPLLELQKMGENQKLLELLLL

Sequences:

>Translated_386_residues
MELIRIAMKKDLENDNSLMNKWATVAGLKNPNPLYDFLNHDGKTFNEFSSIVNIVKSQYPDREYELMKDYCLNLDVKTKA
ARSALEYADANMFFEIEDVLIDSMISCSNMKSKEYGKVYKIHRELSNSVITEFEAVKRLGKLNIKTPEMNSFSRLLLLYH
YLSTGNFSPMAQLIKQIDLSEISENMYIRNTYQTRVHVLMSNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNS
LLFSNYELAQENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINFESDSIMDLQEQAHCFINFNENSKAKEVLDK
LDLLVHNDNELAMHYYLKGRLEQNKACFYSSIEYFKKSNDKFLIRLPLLELQKMGENQKLLELLLL
>Mature_386_residues
MELIRIAMKKDLENDNSLMNKWATVAGLKNPNPLYDFLNHDGKTFNEFSSIVNIVKSQYPDREYELMKDYCLNLDVKTKA
ARSALEYADANMFFEIEDVLIDSMISCSNMKSKEYGKVYKIHRELSNSVITEFEAVKRLGKLNIKTPEMNSFSRLLLLYH
YLSTGNFSPMAQLIKQIDLSEISENMYIRNTYQTRVHVLMSNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNS
LLFSNYELAQENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINFESDSIMDLQEQAHCFINFNENSKAKEVLDK
LDLLVHNDNELAMHYYLKGRLEQNKACFYSSIEYFKKSNDKFLIRLPLLELQKMGENQKLLELLLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPK_BACSU (O31927)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389968.1
- ProteinModelPortal:   O31927
- EnsemblBacteria:   EBBACT00000001182
- GeneID:   939187
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20860
- NMPDR:   fig|224308.1.peg.2091
- GenoList:   BSU20860
- GeneTree:   EBGT00050000004313
- OMA:   SEISENM
- BioCyc:   BSUB:BSU20860-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45321; Mature: 45321

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIRIAMKKDLENDNSLMNKWATVAGLKNPNPLYDFLNHDGKTFNEFSSIVNIVKSQYP
CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCC
DREYELMKDYCLNLDVKTKAARSALEYADANMFFEIEDVLIDSMISCSNMKSKEYGKVYK
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHH
IHRELSNSVITEFEAVKRLGKLNIKTPEMNSFSRLLLLYHYLSTGNFSPMAQLIKQIDLS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
EISENMYIRNTYQTRVHVLMSNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNS
HHHCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCH
LLFSNYELAQENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINFESDSIMDLQE
HHCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHC
QAHCFINFNENSKAKEVLDKLDLLVHNDNELAMHYYLKGRLEQNKACFYSSIEYFKKSND
CCEEEEEECCCCHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCC
KFLIRLPLLELQKMGENQKLLELLLL
CEEEEECHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MELIRIAMKKDLENDNSLMNKWATVAGLKNPNPLYDFLNHDGKTFNEFSSIVNIVKSQYP
CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCC
DREYELMKDYCLNLDVKTKAARSALEYADANMFFEIEDVLIDSMISCSNMKSKEYGKVYK
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHH
IHRELSNSVITEFEAVKRLGKLNIKTPEMNSFSRLLLLYHYLSTGNFSPMAQLIKQIDLS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
EISENMYIRNTYQTRVHVLMSNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNS
HHHCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCH
LLFSNYELAQENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINFESDSIMDLQE
HHCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHC
QAHCFINFNENSKAKEVLDKLDLLVHNDNELAMHYYLKGRLEQNKACFYSSIEYFKKSND
CCEEEEEECCCCHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCC
KFLIRLPLLELQKMGENQKLLELLLL
CEEEEECHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377