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The map label for this gene is yopX

Identifier: 16079132

GI number: 16079132

Start: 2201980

End: 2202384

Strand: Reverse

Name: yopX

Synonym: BSU20730

Alternate gene names: 16079132

Gene position: 2202384-2201980 (Counterclockwise)

Preceding gene: 16079133

Following gene: 16079131

Centisome position: 52.24

GC content: 40.74

Gene sequence:

>405_bases
ATGAACACAGCATACAGAGTTTGGGACGGCGAGCAGATGCATTATTGGGATGATGAAGGTTTGAGCCTTATCATCAAAAG
CAACGGCGATTGGACTTTGAAACGTTTATACACAGATGTTTTGGTTCCGGTTGTAGACAGCACGAATAGAAACGCGGCTC
TCATGTGGGGAGCAAAGGTAAGAGGCAAATTTATTTATGATAGGTCTATAGTAAAAATAACGAGTGATGATAAAGAATCA
TCAGATGTTTGCGAAGTTAAGTTTTCAGATGGCGTTTTCCAAGTAGATGTATCAAAAATTTCCGCTGATTATGACGTGAC
TGCCGTCGGGTGGGTGGAATATGCAACTATTGAAGTAATCGGAGACGTTTATCAAAATCCTGAGTTATTGGAGGGTGTGA
AATGA

Upstream 100 bases:

>100_bases
ATCCGTATGGTGCAATCACAGCTGTAAATAAAGATCAAGTGATTCATTTAACTAAGCTAATTGGAGCAATCATAAATACG
GATGAGGAGGATCCAGTTGA

Downstream 100 bases:

>100_bases
CAATCAATTTGAAAGTAAAACAAGAGAAGCGCAAAGGGTTATCAATTAATGATATCCAAGATGGATACTTCATTTTAAGA
AATGACGATGTTTGGATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNTAYRVWDGEQMHYWDDEGLSLIIKSNGDWTLKRLYTDVLVPVVDSTNRNAALMWGAKVRGKFIYDRSIVKITSDDKES
SDVCEVKFSDGVFQVDVSKISADYDVTAVGWVEYATIEVIGDVYQNPELLEGVK

Sequences:

>Translated_134_residues
MNTAYRVWDGEQMHYWDDEGLSLIIKSNGDWTLKRLYTDVLVPVVDSTNRNAALMWGAKVRGKFIYDRSIVKITSDDKES
SDVCEVKFSDGVFQVDVSKISADYDVTAVGWVEYATIEVIGDVYQNPELLEGVK
>Mature_134_residues
MNTAYRVWDGEQMHYWDDEGLSLIIKSNGDWTLKRLYTDVLVPVVDSTNRNAALMWGAKVRGKFIYDRSIVKITSDDKES
SDVCEVKFSDGVFQVDVSKISADYDVTAVGWVEYATIEVIGDVYQNPELLEGVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPX_BACSU (O34401)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389955.1
- PDB:   2I2L
- PDBsum:   2I2L
- ProteinModelPortal:   O34401
- SMR:   O34401
- EnsemblBacteria:   EBBACT00000000633
- GeneID:   939430
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20730
- NMPDR:   fig|224308.1.peg.2078
- GenoList:   BSU20730
- BioCyc:   BSUB:BSU20730-MONOMER
- InterPro:   IPR019096

Pfam domain/function: PF09643 YopX

EC number: NA

Molecular weight: Translated: 15194; Mature: 15194

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAYRVWDGEQMHYWDDEGLSLIIKSNGDWTLKRLYTDVLVPVVDSTNRNAALMWGAKV
CCCEEEEECCCEEEEECCCCEEEEEECCCCEEHHHHHHHHEEEEECCCCCCEEEEECCEE
RGKFIYDRSIVKITSDDKESSDVCEVKFSDGVFQVDVSKISADYDVTAVGWVEYATIEVI
CEEEEECCEEEEEECCCCCCCCEEEEEECCCEEEEEEEHCCCCCCEEEECEEEEEHEEEE
GDVYQNPELLEGVK
HHHHCCCHHHCCCC
>Mature Secondary Structure
MNTAYRVWDGEQMHYWDDEGLSLIIKSNGDWTLKRLYTDVLVPVVDSTNRNAALMWGAKV
CCCEEEEECCCEEEEECCCCEEEEEECCCCEEHHHHHHHHEEEEECCCCCCEEEEECCEE
RGKFIYDRSIVKITSDDKESSDVCEVKFSDGVFQVDVSKISADYDVTAVGWVEYATIEVI
CEEEEECCEEEEEECCCCCCCCEEEEEECCCEEEEEEEHCCCCCCEEEECEEEEEHEEEE
GDVYQNPELLEGVK
HHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377