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The map label for this gene is yoqH

Identifier: 16079122

GI number: 16079122

Start: 2198313

End: 2198765

Strand: Reverse

Name: yoqH

Synonym: BSU20630

Alternate gene names: 16079122

Gene position: 2198765-2198313 (Counterclockwise)

Preceding gene: 16079123

Following gene: 16079121

Centisome position: 52.16

GC content: 38.63

Gene sequence:

>453_bases
ATGAAACGATTTATTTTAGTTTTATCCTTTTTAAGTATTATTGTTGCCTATCCCATTCAAACAAACGCCAGTCCAATGCC
TTGCAGTGTAATACTGGAGCCGGTAGATAAAAATCTTAAAAATGCTAAAGGTGTAGCATTAATCTATAAGGTGCAATTGA
ACCCACCGAGTGCTGCCAGAACCAATATAAGTATTCTTGCTGTCCATCTTCCTGCACCTTCTTCTTTTGGAAATTACGAC
AGTTACGAAGGATTTGCTACTAAACCAGGTGAGATTAGTTGGCGGTTTAAACTTTATCCTACTCCTGAGGAAGAGAGTCC
TAGTTGGGCGGGAAGAATTGACACAATTTCGGCCGAAATGAAGAATGTTAAAGTGCAAGTGCGTCTGTCAAATTCTAGCA
CACAAAAGTTGGGGCCAAGTATATTAACGAAAAATATTGAGTCCTGTTATTGA

Upstream 100 bases:

>100_bases
GAGATTAAATCAAAATAAAATTGAAGTTTTAATCAAATACAAATGAATAATCAATCCAGAAATAAGGGAAATTAACTAAA
AAAATTGTGAGGAATTTTCA

Downstream 100 bases:

>100_bases
ATGTCTTGGGGCAACAGTGTAAAACAAACTTGGATTGGATTGATGTAAATGATTAAATCGATTATTTTACCTGAAGAAAA
CACAAAAATAACTGTAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKRFILVLSFLSIIVAYPIQTNASPMPCSVILEPVDKNLKNAKGVALIYKVQLNPPSAARTNISILAVHLPAPSSFGNYD
SYEGFATKPGEISWRFKLYPTPEEESPSWAGRIDTISAEMKNVKVQVRLSNSSTQKLGPSILTKNIESCY

Sequences:

>Translated_150_residues
MKRFILVLSFLSIIVAYPIQTNASPMPCSVILEPVDKNLKNAKGVALIYKVQLNPPSAARTNISILAVHLPAPSSFGNYD
SYEGFATKPGEISWRFKLYPTPEEESPSWAGRIDTISAEMKNVKVQVRLSNSSTQKLGPSILTKNIESCY
>Mature_150_residues
MKRFILVLSFLSIIVAYPIQTNASPMPCSVILEPVDKNLKNAKGVALIYKVQLNPPSAARTNISILAVHLPAPSSFGNYD
SYEGFATKPGEISWRFKLYPTPEEESPSWAGRIDTISAEMKNVKVQVRLSNSSTQKLGPSILTKNIESCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOQH_BACSU (O34999)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389945.1
- EnsemblBacteria:   EBBACT00000001928
- GeneID:   939438
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20630
- NMPDR:   fig|224308.1.peg.2068
- GenoList:   BSU20630
- GeneTree:   EBGT00050000002833
- HOGENOM:   HBG338103
- OMA:   SILAVHL
- ProtClustDB:   CLSK887448
- BioCyc:   BSUB:BSU20630-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16546; Mature: 16546

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFILVLSFLSIIVAYPIQTNASPMPCSVILEPVDKNLKNAKGVALIYKVQLNPPSAAR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCC
TNISILAVHLPAPSSFGNYDSYEGFATKPGEISWRFKLYPTPEEESPSWAGRIDTISAEM
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECC
KNVKVQVRLSNSSTQKLGPSILTKNIESCY
CCEEEEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRFILVLSFLSIIVAYPIQTNASPMPCSVILEPVDKNLKNAKGVALIYKVQLNPPSAAR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCC
TNISILAVHLPAPSSFGNYDSYEGFATKPGEISWRFKLYPTPEEESPSWAGRIDTISAEM
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECC
KNVKVQVRLSNSSTQKLGPSILTKNIESCY
CCEEEEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377