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The map label for this gene is yoqL

Identifier: 16079118

GI number: 16079118

Start: 2196389

End: 2197081

Strand: Reverse

Name: yoqL

Synonym: BSU20590

Alternate gene names: 16079118

Gene position: 2197081-2196389 (Counterclockwise)

Preceding gene: 16079119

Following gene: 16079116

Centisome position: 52.12

GC content: 33.19

Gene sequence:

>693_bases
ATTGATAGTAAAAAGCATAAAATAATAAACGGATATTATCACAAGAATTGTATAAGTTGTAAAAGCTGGTTACCGGCAAC
TGAAGAGAATTTTTACTCTGTGAAGAAAAATAAGGATGGACTTCATTCATACTGTAAAGCTTGTGTATTAAAAAAGGCTA
AAGAAAGCATGTTGAAGAATTATGACAAACAGCTTGAACGAATGAGGGAAAGAAATCTTCTTCCAGGGATGAAAGAGGCC
AAAAAGAAATACAACTCAAGTTTGAAAAAGAAAAAAACACAACAAATCTGGCAAGAAAAGAACAAGCTAAAATTAAAAAA
CTACCGTTTACAAAGAGATGCTCACAAGAAACATAACATTACAGATGTACAGTGGCAAAAGTGCAAAGACTATTTTAACA
ACAAGTGTTCCTATTGCGGGCTGAAAATTGAAGATCATAAGATATTATTCAAAGGAACCTATATACAAAGTGATTTTCAT
AAAGAGCATGTAGATCACAAAGGGGCTAATGATATAAGCAACTGCATACCTGCTTGTAAATCTTGCAATAGCTCAAAGCA
CGACTTTGCATTTGAAGAGTGGTACAACTCATCAAACAAAAACTTTTCATCCGAAAGATTACTAAAGATCAAAGAGTGGC
TAAATCGTTTTAAAGAGGAACGACAAGATTCAGAATGGAGGACAAAAGGATAG

Upstream 100 bases:

>100_bases
AATAAAACAGTTTTATCGATTCAAGAGGGAATTAACTGATGATTATGTGTTTAACAGATAGACTAAAGAGCAGGGGGCAA
TTAATATAGGTGAAAAATTA

Downstream 100 bases:

>100_bases
GCTGCAACAAATACATAATTGATACTGTAATGATACTTGCACAAGTAAATAGAGGGGAATTTGAAAACATTGAGCGCAAA
AAATCTCCTAAAAATGAAAG

Product: endonuclease; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDSKKHKIINGYYHKNCISCKSWLPATEENFYSVKKNKDGLHSYCKACVLKKAKESMLKNYDKQLERMRERNLLPGMKEA
KKKYNSSLKKKKTQQIWQEKNKLKLKNYRLQRDAHKKHNITDVQWQKCKDYFNNKCSYCGLKIEDHKILFKGTYIQSDFH
KEHVDHKGANDISNCIPACKSCNSSKHDFAFEEWYNSSNKNFSSERLLKIKEWLNRFKEERQDSEWRTKG

Sequences:

>Translated_230_residues
MDSKKHKIINGYYHKNCISCKSWLPATEENFYSVKKNKDGLHSYCKACVLKKAKESMLKNYDKQLERMRERNLLPGMKEA
KKKYNSSLKKKKTQQIWQEKNKLKLKNYRLQRDAHKKHNITDVQWQKCKDYFNNKCSYCGLKIEDHKILFKGTYIQSDFH
KEHVDHKGANDISNCIPACKSCNSSKHDFAFEEWYNSSNKNFSSERLLKIKEWLNRFKEERQDSEWRTKG
>Mature_230_residues
MDSKKHKIINGYYHKNCISCKSWLPATEENFYSVKKNKDGLHSYCKACVLKKAKESMLKNYDKQLERMRERNLLPGMKEA
KKKYNSSLKKKKTQQIWQEKNKLKLKNYRLQRDAHKKHNITDVQWQKCKDYFNNKCSYCGLKIEDHKILFKGTYIQSDFH
KEHVDHKGANDISNCIPACKSCNSSKHDFAFEEWYNSSNKNFSSERLLKIKEWLNRFKEERQDSEWRTKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOQL_BACSU (O34581)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389941.1
- ProteinModelPortal:   O34581
- SMR:   O34581
- EnsemblBacteria:   EBBACT00000001092
- GeneID:   939974
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20590
- NMPDR:   fig|224308.1.peg.2064
- GenoList:   BSU20590
- BioCyc:   BSUB:BSU20590-MONOMER
- InterPro:   IPR002711
- InterPro:   IPR003615
- SMART:   SM00507

Pfam domain/function: PF01844 HNH

EC number: NA

Molecular weight: Translated: 27592; Mature: 27592

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKKHKIINGYYHKNCISCKSWLPATEENFYSVKKNKDGLHSYCKACVLKKAKESMLKN
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YDKQLERMRERNLLPGMKEAKKKYNSSLKKKKTQQIWQEKNKLKLKNYRLQRDAHKKHNI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDVQWQKCKDYFNNKCSYCGLKIEDHKILFKGTYIQSDFHKEHVDHKGANDISNCIPACK
CCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHH
SCNSSKHDFAFEEWYNSSNKNFSSERLLKIKEWLNRFKEERQDSEWRTKG
CCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDSKKHKIINGYYHKNCISCKSWLPATEENFYSVKKNKDGLHSYCKACVLKKAKESMLKN
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YDKQLERMRERNLLPGMKEAKKKYNSSLKKKKTQQIWQEKNKLKLKNYRLQRDAHKKHNI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDVQWQKCKDYFNNKCSYCGLKIEDHKILFKGTYIQSDFHKEHVDHKGANDISNCIPACK
CCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHH
SCNSSKHDFAFEEWYNSSNKNFSSERLLKIKEWLNRFKEERQDSEWRTKG
CCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377