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The map label for this gene is yorA

Identifier: 16079104

GI number: 16079104

Start: 2188204

End: 2189964

Strand: Reverse

Name: yorA

Synonym: BSU20450

Alternate gene names: 16079104

Gene position: 2189964-2188204 (Counterclockwise)

Preceding gene: 16079105

Following gene: 16079103

Centisome position: 51.95

GC content: 36.06

Gene sequence:

>1761_bases
ATGACATTGTTGAATAAATCCATACGATACTATGTTGACTTTGATCAGTGGGGAATAAATGCATTTAACTCGAATCCAAT
TGAAACAACTAAAGGATTTAATGAAGCTCTTATATATGCATCAGAGAACAACTTTCCTATTGTTGAAGTTCCAAAAGGGA
ATTTTATTATTGATTCAGTAAATACATTAAATCAACGAAATCCTGAAATTGGTGGGGGAATTAAAATCCCATCAAATATG
GAGCTCCTTTTGGATCCAGAAGCAGTGTTTCAAGTTAACCCTAATGGGTATCAGGGCTATTCTTGTTTTTATATTGGGCT
TGCAGAGAACGTAATAATTAGAGGAGGTCGTATTATAGGTGACCGGTATCAACATGATTATTCTCTAATTGATACCGATA
GAAAAACACATGAATGGGGATTTGGAATACATGTTCATGGAAGCAAAAATGTTTTGATTGAAAATGTACAAATCTCAGAT
TGTATTGGAGACAACATTTGGATTGCAGCTCACGGAATGATGAATTACCCAGGGATGGTTTATACGCCTTCCAAAAGTGT
TACCGTAAGAAAATGCGAACTAAAAAGAGGGAGACGGAACAATTTAGCTACTAACGGTTGTGAAGGATTATTGGTTGAAG
ACTGTGATATAGAGGAAGCTGGAGGAGATACAATTGGCCCTCAACTAGGTATTGATTTAGAGGGCTACGGAGAAAACGGA
AGAAAGTATGATCATCCTTATGAGTTAACGATATCGGATTGCAGGTTTAGAAAAAATGGTCGTGGTTCGGTTACTGCTCA
TACAAGCGGTAAAGTTTCCATCAAAGATAACTACTGTGACAATGTTATTTCATATGGCTACAGTACAGATGTGAGTATTA
AGGGTAACAAGATAATAAATGAAGGGGGGTCTAAAGAGTACGGAATAGACTCTGTAGGTGTTTCGAGCACTGAGACTGGC
AACAGAATTCAAATAACTGATAACAATATTCAAGGGTTTAAAATAGGCATGATGATTAGAGGGAAAGGGGTATCGATTGA
TAATAATACCGTAAAGAACGCTTCAAATTGTGCAATAGCAACACATATGGCCGAAGATGTTTCCATTTCAAACAACAGAA
TACAGGACAGCGATTGTATTCAGATCCAGGTGAGAAATTCATCAGATATTAAAGTAAGCAATAATAAAGGGAAAGGTACA
ACTTCAGCATATGCAATTAAAGTGATGGATTCGAATGACGTTAAATTCTTAAATAATACGTTCTCCAATCTTTACGGAGG
TCTATATTGTGAGAGATCTCAGGCAGTCAGAATTAAGCTAAACGATTTCTTATTGAGTGGAAAAGGTTACGGGATATATT
GGGATAAAGATTCAGAAGTCTTCCTAACAAGGAATGAGATATTTGAACCAAGAAATGTTGCAATTATGGGGGCAGCTGAT
ATGTACAATATCAGAATAAGTGATAACCAGATCTATAATTGCAAAGCAATCATTGCGATCCACTTAATAGGCGGTTCTGA
GCATATGGTTAGAGGAAATGAAATTATGTTTAACAGAGATTCAGATCAAGGCTATGGAATATATTTAAACGGGACAAAAA
AGGTTCGATTAATAAGGAATGATGTTCAAGGTATTGGTGCAAGAGTGCTTTCGCATCCATTTGCAACGTTTAATGCTTCC
AGTACAACTTTAATACATAATACATACGACAGCGGCACACCTAGATTAGCCTTAGATGATACAGTAATCGATTATAAATA
A

Upstream 100 bases:

>100_bases
CTGGACGCAATGGAACGCAGAATCAAGTTTTTTATGACTATATTGCTGTTCTAACTAAATTCATTAATGAAAATGTGTAT
TGTATGGCTGGTGTAGCACC

Downstream 100 bases:

>100_bases
AAAATTCTTAACGAGAACACTTGTTCCCTTTATGGGTTTTGGTATATAATTTAGTAGTACCAAAAATTTCAAAACAGGGG
ATGAGAGTATGAGTGAGCAG

Product: capsid component; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTLLNKSIRYYVDFDQWGINAFNSNPIETTKGFNEALIYASENNFPIVEVPKGNFIIDSVNTLNQRNPEIGGGIKIPSNM
ELLLDPEAVFQVNPNGYQGYSCFYIGLAENVIIRGGRIIGDRYQHDYSLIDTDRKTHEWGFGIHVHGSKNVLIENVQISD
CIGDNIWIAAHGMMNYPGMVYTPSKSVTVRKCELKRGRRNNLATNGCEGLLVEDCDIEEAGGDTIGPQLGIDLEGYGENG
RKYDHPYELTISDCRFRKNGRGSVTAHTSGKVSIKDNYCDNVISYGYSTDVSIKGNKIINEGGSKEYGIDSVGVSSTETG
NRIQITDNNIQGFKIGMMIRGKGVSIDNNTVKNASNCAIATHMAEDVSISNNRIQDSDCIQIQVRNSSDIKVSNNKGKGT
TSAYAIKVMDSNDVKFLNNTFSNLYGGLYCERSQAVRIKLNDFLLSGKGYGIYWDKDSEVFLTRNEIFEPRNVAIMGAAD
MYNIRISDNQIYNCKAIIAIHLIGGSEHMVRGNEIMFNRDSDQGYGIYLNGTKKVRLIRNDVQGIGARVLSHPFATFNAS
STTLIHNTYDSGTPRLALDDTVIDYK

Sequences:

>Translated_586_residues
MTLLNKSIRYYVDFDQWGINAFNSNPIETTKGFNEALIYASENNFPIVEVPKGNFIIDSVNTLNQRNPEIGGGIKIPSNM
ELLLDPEAVFQVNPNGYQGYSCFYIGLAENVIIRGGRIIGDRYQHDYSLIDTDRKTHEWGFGIHVHGSKNVLIENVQISD
CIGDNIWIAAHGMMNYPGMVYTPSKSVTVRKCELKRGRRNNLATNGCEGLLVEDCDIEEAGGDTIGPQLGIDLEGYGENG
RKYDHPYELTISDCRFRKNGRGSVTAHTSGKVSIKDNYCDNVISYGYSTDVSIKGNKIINEGGSKEYGIDSVGVSSTETG
NRIQITDNNIQGFKIGMMIRGKGVSIDNNTVKNASNCAIATHMAEDVSISNNRIQDSDCIQIQVRNSSDIKVSNNKGKGT
TSAYAIKVMDSNDVKFLNNTFSNLYGGLYCERSQAVRIKLNDFLLSGKGYGIYWDKDSEVFLTRNEIFEPRNVAIMGAAD
MYNIRISDNQIYNCKAIIAIHLIGGSEHMVRGNEIMFNRDSDQGYGIYLNGTKKVRLIRNDVQGIGARVLSHPFATFNAS
STTLIHNTYDSGTPRLALDDTVIDYK
>Mature_585_residues
TLLNKSIRYYVDFDQWGINAFNSNPIETTKGFNEALIYASENNFPIVEVPKGNFIIDSVNTLNQRNPEIGGGIKIPSNME
LLLDPEAVFQVNPNGYQGYSCFYIGLAENVIIRGGRIIGDRYQHDYSLIDTDRKTHEWGFGIHVHGSKNVLIENVQISDC
IGDNIWIAAHGMMNYPGMVYTPSKSVTVRKCELKRGRRNNLATNGCEGLLVEDCDIEEAGGDTIGPQLGIDLEGYGENGR
KYDHPYELTISDCRFRKNGRGSVTAHTSGKVSIKDNYCDNVISYGYSTDVSIKGNKIINEGGSKEYGIDSVGVSSTETGN
RIQITDNNIQGFKIGMMIRGKGVSIDNNTVKNASNCAIATHMAEDVSISNNRIQDSDCIQIQVRNSSDIKVSNNKGKGTT
SAYAIKVMDSNDVKFLNNTFSNLYGGLYCERSQAVRIKLNDFLLSGKGYGIYWDKDSEVFLTRNEIFEPRNVAIMGAADM
YNIRISDNQIYNCKAIIAIHLIGGSEHMVRGNEIMFNRDSDQGYGIYLNGTKKVRLIRNDVQGIGARVLSHPFATFNASS
TTLIHNTYDSGTPRLALDDTVIDYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 PbH1 repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YORA_BACSU (O31912)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389927.1
- ProteinModelPortal:   O31912
- SMR:   O31912
- EnsemblBacteria:   EBBACT00000003978
- GeneID:   940009
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20450
- NMPDR:   fig|224308.1.peg.2050
- GenoList:   BSU20450
- GeneTree:   EBGT00050000002088
- ProtClustDB:   CLSK886690
- BioCyc:   BSUB:BSU20450-MONOMER
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050
- Gene3D:   G3DSA:2.160.20.10
- SMART:   SM00710

Pfam domain/function: SSF51126 Pectin_lyas_like

EC number: NA

Molecular weight: Translated: 64974; Mature: 64843

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLNKSIRYYVDFDQWGINAFNSNPIETTKGFNEALIYASENNFPIVEVPKGNFIIDSV
CCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEECC
NTLNQRNPEIGGGIKIPSNMELLLDPEAVFQVNPNGYQGYSCFYIGLAENVIIRGGRIIG
HHCCCCCCCCCCCEECCCCCEEEECCCCEEEECCCCCCCEEEEEEEEECCEEEECCEEEC
DRYQHDYSLIDTDRKTHEWGFGIHVHGSKNVLIENVQISDCIGDNIWIAAHGMMNYPGMV
CCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEEEHHHCCCCEEEEEECCCCCCCEE
YTPSKSVTVRKCELKRGRRNNLATNGCEGLLVEDCDIEEAGGDTIGPQLGIDLEGYGENG
ECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECEEEECCCCCC
RKYDHPYELTISDCRFRKNGRGSVTAHTSGKVSIKDNYCDNVISYGYSTDVSIKGNKIIN
CCCCCCEEEEEEEEEECCCCCCCEEEECCCEEEECCCCCCHHHHCCCCEEEEEECCEEEC
EGGSKEYGIDSVGVSSTETGNRIQITDNNIQGFKIGMMIRGKGVSIDNNTVKNASNCAIA
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEECCCCCCCCCCCEEE
THMAEDVSISNNRIQDSDCIQIQVRNSSDIKVSNNKGKGTTSAYAIKVMDSNDVKFLNNT
EECCCCEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCEEEEEEEECCCCCEEHHHH
FSNLYGGLYCERSQAVRIKLNDFLLSGKGYGIYWDKDSEVFLTRNEIFEPRNVAIMGAAD
HHHHHCCEEEECCCEEEEEEEEEEEECCCEEEEECCCCCEEEEHHHCCCCCCEEEEECCE
MYNIRISDNQIYNCKAIIAIHLIGGSEHMVRGNEIMFNRDSDQGYGIYLNGTKKVRLIRN
EEEEEECCCEEEEEEEEEEEEEECCCCEEEECCEEEEECCCCCCCEEEECCCEEEEEEEH
DVQGIGARVLSHPFATFNASSTTLIHNTYDSGTPRLALDDTVIDYK
HHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCEEEECCEEECCC
>Mature Secondary Structure 
TLLNKSIRYYVDFDQWGINAFNSNPIETTKGFNEALIYASENNFPIVEVPKGNFIIDSV
CCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEECC
NTLNQRNPEIGGGIKIPSNMELLLDPEAVFQVNPNGYQGYSCFYIGLAENVIIRGGRIIG
HHCCCCCCCCCCCEECCCCCEEEECCCCEEEECCCCCCCEEEEEEEEECCEEEECCEEEC
DRYQHDYSLIDTDRKTHEWGFGIHVHGSKNVLIENVQISDCIGDNIWIAAHGMMNYPGMV
CCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEEEHHHCCCCEEEEEECCCCCCCEE
YTPSKSVTVRKCELKRGRRNNLATNGCEGLLVEDCDIEEAGGDTIGPQLGIDLEGYGENG
ECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECEEEECCCCCC
RKYDHPYELTISDCRFRKNGRGSVTAHTSGKVSIKDNYCDNVISYGYSTDVSIKGNKIIN
CCCCCCEEEEEEEEEECCCCCCCEEEECCCEEEECCCCCCHHHHCCCCEEEEEECCEEEC
EGGSKEYGIDSVGVSSTETGNRIQITDNNIQGFKIGMMIRGKGVSIDNNTVKNASNCAIA
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEECCCCCCCCCCCEEE
THMAEDVSISNNRIQDSDCIQIQVRNSSDIKVSNNKGKGTTSAYAIKVMDSNDVKFLNNT
EECCCCEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCEEEEEEEECCCCCEEHHHH
FSNLYGGLYCERSQAVRIKLNDFLLSGKGYGIYWDKDSEVFLTRNEIFEPRNVAIMGAAD
HHHHHCCEEEECCCEEEEEEEEEEEECCCEEEEECCCCCEEEEHHHCCCCCCEEEEECCE
MYNIRISDNQIYNCKAIIAIHLIGGSEHMVRGNEIMFNRDSDQGYGIYLNGTKKVRLIRN
EEEEEECCCEEEEEEEEEEEEEECCCCEEEECCEEEEECCCCCCCEEEECCCEEEEEEEH
DVQGIGARVLSHPFATFNASSTTLIHNTYDSGTPRLALDDTVIDYK
HHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377