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The map label for this gene is yorD

Identifier: 16079101

GI number: 16079101

Start: 2186985

End: 2187299

Strand: Reverse

Name: yorD

Synonym: BSU20420

Alternate gene names: 16079101

Gene position: 2187299-2186985 (Counterclockwise)

Preceding gene: 16079102

Following gene: 16079100

Centisome position: 51.89

GC content: 35.87

Gene sequence:

>315_bases
GTGGAGTTTAAAGTTGGACAAGACGTATCAGAAATTTGGAATATCCATGGATCAATTCTTCCGGAAGTTTTAATGTATAT
GTTCCCTCGTTCAGACGAATCTTATGATTGGGAATTTGTAAATGACAACGGAAGACATATCTTTACTGCCTGGAGAAAAA
GTGAACCTATTCCTACATTAGAGGAAATTGAAAAAGCAGCAATTGAGCTTGAAGAGAAGAAAAATGCACCTAAGCCAAAA
ACTCTCGAAGAAAGAGTTGCTGATTTAGAAAAACAAGTAGCTTACTTAACGAGTAAGGTTGAAGGAACAAACTAA

Upstream 100 bases:

>100_bases
TGGTTGTGGAGTGAGCTTGTTTGAAAATAGCAAACTCTTTACCTATATAATGAAAATATGATAGAATATAGAAGAAATTG
ATAATTGAGGAGATGTTTTT

Downstream 100 bases:

>100_bases
CAAGAGTCCCTTATTGGGGCTTTTAAATTTAAATAAAATGATAATTTTATTCGAATTAAAAAGAGCGCAAATGAAATACA
AAAATAAAAAATATAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEFKVGQDVSEIWNIHGSILPEVLMYMFPRSDESYDWEFVNDNGRHIFTAWRKSEPIPTLEEIEKAAIELEEKKNAPKPK
TLEERVADLEKQVAYLTSKVEGTN

Sequences:

>Translated_104_residues
MEFKVGQDVSEIWNIHGSILPEVLMYMFPRSDESYDWEFVNDNGRHIFTAWRKSEPIPTLEEIEKAAIELEEKKNAPKPK
TLEERVADLEKQVAYLTSKVEGTN
>Mature_104_residues
MEFKVGQDVSEIWNIHGSILPEVLMYMFPRSDESYDWEFVNDNGRHIFTAWRKSEPIPTLEEIEKAAIELEEKKNAPKPK
TLEERVADLEKQVAYLTSKVEGTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCP1_BACSU (P68575)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389924.1
- ProteinModelPortal:   P68575
- EnsemblBacteria:   EBBACT00000001854
- GeneID:   940145
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20420
- NMPDR:   fig|224308.1.peg.2047
- GenoList:   BSU20420
- BioCyc:   BSUB:BSU20420-MONOMER
- GO:   GO:0005737
- InterPro:   IPR019094

Pfam domain/function: PF09636 XkdW

EC number: NA

Molecular weight: Translated: 12113; Mature: 12113

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKVGQDVSEIWNIHGSILPEVLMYMFPRSDESYDWEFVNDNGRHIFTAWRKSEPIPTL
CCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCH
EEIEKAAIELEEKKNAPKPKTLEERVADLEKQVAYLTSKVEGTN
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEFKVGQDVSEIWNIHGSILPEVLMYMFPRSDESYDWEFVNDNGRHIFTAWRKSEPIPTL
CCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCH
EEIEKAAIELEEKKNAPKPKTLEERVADLEKQVAYLTSKVEGTN
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8755892