Click here to switch to the map view.

The map label for this gene is yorF

Identifier: 16079099

GI number: 16079099

Start: 2185504

End: 2186418

Strand: Reverse

Name: yorF

Synonym: BSU20400

Alternate gene names: 16079099

Gene position: 2186418-2185504 (Counterclockwise)

Preceding gene: 16079100

Following gene: 16079098

Centisome position: 51.86

GC content: 34.21

Gene sequence:

>915_bases
ATGACAGAAAACAAAACGGTATTACGTGAAGCATCAAACGTTGTAACAATTGAAGGAACTTTAGCTGAAGTACGACACAC
TGAATGGAAAAATGGAAATGGACTAAATATTGAATTAGACATTGAGGTTGCACCTAACGAAGTACATACAGTTAAAGGCT
TTTCCAAGTATAAGAAAGATGATGGTACTGATAATGCAGTTGCAAAGGGGTACCAGACTATTGTAAGCGAGTATAAGTCA
ATCGCAAAACACGGTAGAGATGAAGCTGACAAAGTAAGAATTACTCAAGGTAAAATTAGCTTAAATGAGTATTATTCACA
CGGGATTTTTAAATCATATCCACAATTAATGGCTAACTTTGTGAACAGACTGGATGCTAATGAAGAATTCAATCCCAGAG
CAGAATTTGATGTTGAGGTGTTTGTAAAGAACGTAACCGAAGAAAAAGTAAAAGGGGAAGAAACAGGTAGAGTTAATTTA
AATGGCTATATTCCTGTGTACAACGGAAAAGTAATTCCTTTTACATTTGTAGTCACAAAAGAAGGCTCACAATATGTTGA
AAATAATTATGAAAAGGGAACTACCGTTAACGTTTTTGGGAAGATCATTAATTATAAAGAACAAAAAGTAACAACCAAAG
TAGCGGCATTTGGAGAAGATAAGAAAGAAATTACTTCAATTACAAGAAGAGAGTATCTAATTACAGGTGGTAATGATCCT
TATGATGAGGATAGTAAGAATGCTTTTAATGCAGATGCAATTAAAAAAGCGTTGACTGAAAGAGAGATTTATCTAGACGA
GCTTAAGAAAGAAGGAAATAAAGAAAACAATAAAAAGTCTGGGTTTGGTGGAAGTGCTCCTAATAACAAGCCTTCAAAGC
CGGTTGAAATTTCAGATGATGATCTCCCTTTCTAA

Upstream 100 bases:

>100_bases
TAGTAAAGAACTTGGAATCAAAGACTGCAAGTTTAGAAAAATTACATATTCAAAGAAAAATCACAATAAACAAAAATAAA
AATAGAGGATGATTAAAAAT

Downstream 100 bases:

>100_bases
AATAAAATAGATCATTAATCTAATACATAACTGGGGTGAGCTCCGACTCACCTAACAAATTCAAAATAAAAGGAGAACTG
AAATGGCAATCGATATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTENKTVLREASNVVTIEGTLAEVRHTEWKNGNGLNIELDIEVAPNEVHTVKGFSKYKKDDGTDNAVAKGYQTIVSEYKS
IAKHGRDEADKVRITQGKISLNEYYSHGIFKSYPQLMANFVNRLDANEEFNPRAEFDVEVFVKNVTEEKVKGEETGRVNL
NGYIPVYNGKVIPFTFVVTKEGSQYVENNYEKGTTVNVFGKIINYKEQKVTTKVAAFGEDKKEITSITRREYLITGGNDP
YDEDSKNAFNADAIKKALTEREIYLDELKKEGNKENNKKSGFGGSAPNNKPSKPVEISDDDLPF

Sequences:

>Translated_304_residues
MTENKTVLREASNVVTIEGTLAEVRHTEWKNGNGLNIELDIEVAPNEVHTVKGFSKYKKDDGTDNAVAKGYQTIVSEYKS
IAKHGRDEADKVRITQGKISLNEYYSHGIFKSYPQLMANFVNRLDANEEFNPRAEFDVEVFVKNVTEEKVKGEETGRVNL
NGYIPVYNGKVIPFTFVVTKEGSQYVENNYEKGTTVNVFGKIINYKEQKVTTKVAAFGEDKKEITSITRREYLITGGNDP
YDEDSKNAFNADAIKKALTEREIYLDELKKEGNKENNKKSGFGGSAPNNKPSKPVEISDDDLPF
>Mature_303_residues
TENKTVLREASNVVTIEGTLAEVRHTEWKNGNGLNIELDIEVAPNEVHTVKGFSKYKKDDGTDNAVAKGYQTIVSEYKSI
AKHGRDEADKVRITQGKISLNEYYSHGIFKSYPQLMANFVNRLDANEEFNPRAEFDVEVFVKNVTEEKVKGEETGRVNLN
GYIPVYNGKVIPFTFVVTKEGSQYVENNYEKGTTVNVFGKIINYKEQKVTTKVAAFGEDKKEITSITRREYLITGGNDPY
DEDSKNAFNADAIKKALTEREIYLDELKKEGNKENNKKSGFGGSAPNNKPSKPVEISDDDLPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YORF_BACSU (O31908)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389922.1
- ProteinModelPortal:   O31908
- EnsemblBacteria:   EBBACT00000003405
- GeneID:   940146
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20400
- NMPDR:   fig|224308.1.peg.2045
- GenoList:   BSU20400
- GeneTree:   EBGT00050000005846
- OMA:   FTANDEY
- ProtClustDB:   CLSK254612
- BioCyc:   BSUB:BSU20400-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34204; Mature: 34073

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENKTVLREASNVVTIEGTLAEVRHTEWKNGNGLNIELDIEVAPNEVHTVKGFSKYKKD
CCCCHHHHHHCCCEEEEECHHHHHHHCCCCCCCCEEEEEEEEECCCHHEEHHHHHHHCCC
DGTDNAVAKGYQTIVSEYKSIAKHGRDEADKVRITQGKISLNEYYSHGIFKSYPQLMANF
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECEEEHHHHHHCCHHHHHHHHHHHH
VNRLDANEEFNPRAEFDVEVFVKNVTEEKVKGEETGRVNLNGYIPVYNGKVIPFTFVVTK
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCEEEEEEEEEEC
EGSQYVENNYEKGTTVNVFGKIINYKEQKVTTKVAAFGEDKKEITSITRREYLITGGNDP
CCCHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCC
YDEDSKNAFNADAIKKALTEREIYLDELKKEGNKENNKKSGFGGSAPNNKPSKPVEISDD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
DLPF
CCCC
>Mature Secondary Structure 
TENKTVLREASNVVTIEGTLAEVRHTEWKNGNGLNIELDIEVAPNEVHTVKGFSKYKKD
CCCHHHHHHCCCEEEEECHHHHHHHCCCCCCCCEEEEEEEEECCCHHEEHHHHHHHCCC
DGTDNAVAKGYQTIVSEYKSIAKHGRDEADKVRITQGKISLNEYYSHGIFKSYPQLMANF
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECEEEHHHHHHCCHHHHHHHHHHHH
VNRLDANEEFNPRAEFDVEVFVKNVTEEKVKGEETGRVNLNGYIPVYNGKVIPFTFVVTK
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCEEEEEEEEEEC
EGSQYVENNYEKGTTVNVFGKIINYKEQKVTTKVAAFGEDKKEITSITRREYLITGGNDP
CCCHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCC
YDEDSKNAFNADAIKKALTEREIYLDELKKEGNKENNKKSGFGGSAPNNKPSKPVEISDD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
DLPF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377