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The map label for this gene is yorS

Identifier: 16079086

GI number: 16079086

Start: 2172932

End: 2173450

Strand: Reverse

Name: yorS

Synonym: BSU20270

Alternate gene names: 16079086

Gene position: 2173450-2172932 (Counterclockwise)

Preceding gene: 16079087

Following gene: 16079085

Centisome position: 51.56

GC content: 31.98

Gene sequence:

>519_bases
ATGAAAAAAGTAATTGCGATTGACATGGATCAGGTCTTAGCTGATTTACTAAGTGATTGGGTAGCTTACATTAACACATA
CGATGATCCTTTTCTCAAAGAGAAAGACATCCTATGTTGGGATATAAAAAAATATACAAATACCAACAATAATGTTTATA
GACATTTAGATTACGATTTGTTCAGAAATCTAAATGTTATAGAAGGTAGCCAAAGAGTGACAAAAGAGCTGATGAAGAAA
TATGAAGTGTATGTTGTGACTACAGCAACAAACCATCCAGATTCCCTTAAAGCAAAGCTTGAATGGCTTACAGAATATTT
TCCATTTATTCCTCATAGCAATGTTGTGCTTTGTGGCAATAAAAACATAATTAAAGCAGACATCATGATCGATGATGGAA
TACATAACTTAGAATCATTTGAAGGAATGAAGATACTATTTGATGCTCCCCATAACAGGAATGAAAATAGATTTATTCGT
GTTATGAATTGGGAAGAGATTGAACGAAAATTACTTTAA

Upstream 100 bases:

>100_bases
TGAGCAATGCGGGATTACATACATATTCATGGGATACTGGACAATGGTCAAGTGACGAAATTGCTAAAGACATAATCTTT
TTAGTGGAATAGGGGAATTT

Downstream 100 bases:

>100_bases
AATATCTCATTTATCCAGAAAGGAGAAAACAGTGGAACGTTTTATTAAAAGACTGTCAGCTTCTTGTGAGTCAACAATTC
ATCACAAGGTATATCAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKVIAIDMDQVLADLLSDWVAYINTYDDPFLKEKDILCWDIKKYTNTNNNVYRHLDYDLFRNLNVIEGSQRVTKELMKK
YEVYVVTTATNHPDSLKAKLEWLTEYFPFIPHSNVVLCGNKNIIKADIMIDDGIHNLESFEGMKILFDAPHNRNENRFIR
VMNWEEIERKLL

Sequences:

>Translated_172_residues
MKKVIAIDMDQVLADLLSDWVAYINTYDDPFLKEKDILCWDIKKYTNTNNNVYRHLDYDLFRNLNVIEGSQRVTKELMKK
YEVYVVTTATNHPDSLKAKLEWLTEYFPFIPHSNVVLCGNKNIIKADIMIDDGIHNLESFEGMKILFDAPHNRNENRFIR
VMNWEEIERKLL
>Mature_172_residues
MKKVIAIDMDQVLADLLSDWVAYINTYDDPFLKEKDILCWDIKKYTNTNNNVYRHLDYDLFRNLNVIEGSQRVTKELMKK
YEVYVVTTATNHPDSLKAKLEWLTEYFPFIPHSNVVLCGNKNIIKADIMIDDGIHNLESFEGMKILFDAPHNRNENRFIR
VMNWEEIERKLL

Specific function: Dephosphorylates the 5' and 2'(3')-phosphates of deoxyribonucleotides (Potential)

COG id: COG4502

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'(3')-deoxyribonucleotidase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 53DR_BACSU (P68522)

Other databases:

- EMBL:   AL009126
- PIR:   T12904
- RefSeq:   NP_389909.1
- ProteinModelPortal:   P68522
- SMR:   P68522
- EnsemblBacteria:   EBBACT00000004088
- GeneID:   939520
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20270
- NMPDR:   fig|224308.1.peg.2032
- GenoList:   BSU20270
- GeneTree:   EBGT00050000002411
- HOGENOM:   HBG399357
- OMA:   PTSFHDK
- BioCyc:   BSUB:BSU20270-MONOMER
- InterPro:   IPR010708
- InterPro:   IPR023214
- Gene3D:   G3DSA:3.40.50.1000

Pfam domain/function: PF06941 NT5C; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 20418; Mature: 20418

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIAIDMDQVLADLLSDWVAYINTYDDPFLKEKDILCWDIKKYTNTNNNVYRHLDYDL
CCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCCEEEEECHHH
FRNLNVIEGSQRVTKELMKKYEVYVVTTATNHPDSLKAKLEWLTEYFPFIPHSNVVLCGN
HCCCCEECCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECC
KNIIKADIMIDDGIHNLESFEGMKILFDAPHNRNENRFIRVMNWEEIERKLL
CCEEEEEEEEECCCCCHHHCCCEEEEEECCCCCCCCCEEEEECHHHHHHHCC
>Mature Secondary Structure
MKKVIAIDMDQVLADLLSDWVAYINTYDDPFLKEKDILCWDIKKYTNTNNNVYRHLDYDL
CCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCCEEEEECHHH
FRNLNVIEGSQRVTKELMKKYEVYVVTTATNHPDSLKAKLEWLTEYFPFIPHSNVVLCGN
HCCCCEECCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECC
KNIIKADIMIDDGIHNLESFEGMKILFDAPHNRNENRFIRVMNWEEIERKLL
CCEEEEEEEEECCCCCHHHCCCEEEEEECCCCCCCCCEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377