Click here to switch to the map view.

The map label for this gene is yosC

Identifier: 16079076

GI number: 16079076

Start: 2168910

End: 2169452

Strand: Reverse

Name: yosC

Synonym: BSU20170

Alternate gene names: 16079076

Gene position: 2169452-2168910 (Counterclockwise)

Preceding gene: 16079077

Following gene: 16079075

Centisome position: 51.46

GC content: 35.36

Gene sequence:

>543_bases
ATGATTTCCCGGGCAAGCGCAGTATACGACAAATTAAAACAAGCAGAAAGAAATATTAGGGGAGATGAGAGTATGCAAAC
CTTAGATGCACCGATTTACGAAGTTAAACAGGAAAGTGACTGGTATAAATCTGAGAAGAAACGCAAAGAGGATATAAACT
CTTTCTTTGATAAATTCGAAGAAAAGTATGGAGTCAAGGAAGGCTTCTCGTTTTATCACTCTGAGTACTTTGGAGTCTAC
GAAGGAACAGAAGCGTATGAAATATTTAAAAATGACATTGTTAAAAATCAAGTAGACGGATTCTATGCTTTCAAAAAACG
ATCTAAATACTTTAAAGAAATAAAAGCTATGATTGAGCAAATTGAAGAAGTGTATCCATTTAGGTCTCATGATGAGCTGG
GGTTAAACAACATGACTGGTCGTCAATGGATAGGTGACAGGTGGTTCTTTGGAGTTAAAACTGAACAGCTTGTTAATGGA
GACAGTGTGGTTGCTACTGACTATAAAGATTATCTAAAAATTGTAATGGAGCATTTAGATTAA

Upstream 100 bases:

>100_bases
TAACTGAAAGAGACAAGGTATATGGACTAGACGGTCTGATGTTGGTGGATCTATAAAAAGGAAAGATATAGATGGGGAAA
TATGATCAAAGGAAATACTA

Downstream 100 bases:

>100_bases
AATTCAATTTTTAAAGAGACTTATAAGGAGGTGAATAAGTGGGACGCCATAAAGCAACGATTGAAGGATTGGTTATGAAA
GAAAGGTATTACTCACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MISRASAVYDKLKQAERNIRGDESMQTLDAPIYEVKQESDWYKSEKKRKEDINSFFDKFEEKYGVKEGFSFYHSEYFGVY
EGTEAYEIFKNDIVKNQVDGFYAFKKRSKYFKEIKAMIEQIEEVYPFRSHDELGLNNMTGRQWIGDRWFFGVKTEQLVNG
DSVVATDYKDYLKIVMEHLD

Sequences:

>Translated_180_residues
MISRASAVYDKLKQAERNIRGDESMQTLDAPIYEVKQESDWYKSEKKRKEDINSFFDKFEEKYGVKEGFSFYHSEYFGVY
EGTEAYEIFKNDIVKNQVDGFYAFKKRSKYFKEIKAMIEQIEEVYPFRSHDELGLNNMTGRQWIGDRWFFGVKTEQLVNG
DSVVATDYKDYLKIVMEHLD
>Mature_180_residues
MISRASAVYDKLKQAERNIRGDESMQTLDAPIYEVKQESDWYKSEKKRKEDINSFFDKFEEKYGVKEGFSFYHSEYFGVY
EGTEAYEIFKNDIVKNQVDGFYAFKKRSKYFKEIKAMIEQIEEVYPFRSHDELGLNNMTGRQWIGDRWFFGVKTEQLVNG
DSVVATDYKDYLKIVMEHLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOSC_BACSU (O31886)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389899.1
- EnsemblBacteria:   EBBACT00000002518
- GeneID:   939561
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20170
- NMPDR:   fig|224308.1.peg.2022
- GenoList:   BSU20170
- GeneTree:   EBGT00070000037936
- BioCyc:   BSUB:BSU20170-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21461; Mature: 21461

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRASAVYDKLKQAERNIRGDESMQTLDAPIYEVKQESDWYKSEKKRKEDINSFFDKFE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYGVKEGFSFYHSEYFGVYEGTEAYEIFKNDIVKNQVDGFYAFKKRSKYFKEIKAMIEQ
HHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEVYPFRSHDELGLNNMTGRQWIGDRWFFGVKTEQLVNGDSVVATDYKDYLKIVMEHLD
HHHHCCCCCCCCCCCCCCCCCHHCCCCCEECCCHHHHHCCCCEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MISRASAVYDKLKQAERNIRGDESMQTLDAPIYEVKQESDWYKSEKKRKEDINSFFDKFE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYGVKEGFSFYHSEYFGVYEGTEAYEIFKNDIVKNQVDGFYAFKKRSKYFKEIKAMIEQ
HHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEVYPFRSHDELGLNNMTGRQWIGDRWFFGVKTEQLVNGDSVVATDYKDYLKIVMEHLD
HHHHCCCCCCCCCCCCCCCCCHHCCCCCEECCCHHHHHCCCCEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377