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The map label for this gene is yotD

Identifier: 16079050

GI number: 16079050

Start: 2154887

End: 2155018

Strand: Reverse

Name: yotD

Synonym: BSU19920

Alternate gene names: 16079050

Gene position: 2155018-2154887 (Counterclockwise)

Preceding gene: 16079051

Following gene: 16079049

Centisome position: 51.12

GC content: 31.06

Gene sequence:

>132_bases
ATGGACAGTAGAGAACAAATTGATTGGACTTGTAATGAATGCAATTTTAGTTGGATAGGTGACAATTCAGATTTTTCATG
TCCTTCTTGTGATGAAATCGATATAAAGCCAAAAAATAAGATACTTGATTGA

Upstream 100 bases:

>100_bases
TTGGATTCTTTCGCATATAGGTGATTCAGAGAAAGAAAAGGAGAACTACAATTGGAAGTAGATAAAATGTTGAATTTATT
AAGAAAGAGGTGTAGCTATA

Downstream 100 bases:

>100_bases
TTAAGACGTTGATTTCATTTAGTGGGATAAACTCAATGAAAGAGATTGAATTTGAAGAAGTTAAAAAATTTGTTGAAGTA
ATGTCTCGGCGACTTAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 43

Protein sequence:

>43_residues
MDSREQIDWTCNECNFSWIGDNSDFSCPSCDEIDIKPKNKILD

Sequences:

>Translated_43_residues
MDSREQIDWTCNECNFSWIGDNSDFSCPSCDEIDIKPKNKILD
>Mature_43_residues
MDSREQIDWTCNECNFSWIGDNSDFSCPSCDEIDIKPKNKILD

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOTD_BACSU (O34407)

Other databases:

- EMBL:   AF006665
- EMBL:   AL009126
- RefSeq:   NP_389873.1
- EnsemblBacteria:   EBBACT00000001134
- GeneID:   940092
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19920
- NMPDR:   fig|224308.1.peg.1996
- GenoList:   BSU19920
- BioCyc:   BSUB:BSU19920-MONOMER
- InterPro:   IPR004039
- Gene3D:   G3DSA:2.20.28.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5013; Mature: 5013

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
9.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
11.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSREQIDWTCNECNFSWIGDNSDFSCPSCDEIDIKPKNKILD
CCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSREQIDWTCNECNFSWIGDNSDFSCPSCDEIDIKPKNKILD
CCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377