Click here to switch to the map view.

The map label for this gene is yocN

Identifier: 16078988

GI number: 16078988

Start: 2099127

End: 2099360

Strand: Direct

Name: yocN

Synonym: BSU19280

Alternate gene names: 16078988

Gene position: 2099127-2099360 (Clockwise)

Preceding gene: 16078987

Following gene: 16078991

Centisome position: 49.79

GC content: 40.6

Gene sequence:

>234_bases
ATGTTCTTTTCACCCTCCGTCGTAAATGTCGGCGGATTTAAAATCAATACGATGGATCGAGGTTCCTCTTTAACACTCGG
TCCGTATCAGCAGGTCGATTACTTTTTATCAGCTAAAATAAATCAAGGGTTTGGAGAAGAAAATGGCGACTTTACTCCTC
TTGTCGTGCCGATTTCAAATGTATTAGATGCAGATCTTGTTGATTCGAACTCAGCGAAAAACAGTGTGGTGTAA

Upstream 100 bases:

>100_bases
ATGGGCACGAGAAGCCATGTGGATGACAGAGACCAAATTGATTCTCCGGCCTCTTTTGAAAGTGAAGCGGTTAACTCCTC
AATCAAAAGGAAGTGATGAG

Downstream 100 bases:

>100_bases
TAAGAACAGGGCGCACATGCCCTGTTCTTGTTTTTATATATAAAAAAAGCCTAACCATTTTTTGAACGGCTGGCTCATCA
AATATTCAGCTGCACAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MFFSPSVVNVGGFKINTMDRGSSLTLGPYQQVDYFLSAKINQGFGEENGDFTPLVVPISNVLDADLVDSNSAKNSVV

Sequences:

>Translated_77_residues
MFFSPSVVNVGGFKINTMDRGSSLTLGPYQQVDYFLSAKINQGFGEENGDFTPLVVPISNVLDADLVDSNSAKNSVV
>Mature_77_residues
MFFSPSVVNVGGFKINTMDRGSSLTLGPYQQVDYFLSAKINQGFGEENGDFTPLVVPISNVLDADLVDSNSAKNSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOCN_BACSU (O34855)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   C69902
- RefSeq:   NP_389810.1
- EnsemblBacteria:   EBBACT00000000787
- GeneID:   939594
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19280
- NMPDR:   fig|224308.1.peg.1933
- GenoList:   BSU19280
- GeneTree:   EBGT00050000001884
- HOGENOM:   HBG338073
- OMA:   QVDYFLS
- ProtClustDB:   CLSK887421
- BioCyc:   BSUB:BSU19280-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8260; Mature: 8260

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFSPSVVNVGGFKINTMDRGSSLTLGPYQQVDYFLSAKINQGFGEENGDFTPLVVPISN
CCCCCCEEECCCEEEEECCCCCCEEECCHHHHHEEEEEECCCCCCCCCCCCCEEEEECCC
VLDADLVDSNSAKNSVV
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFFSPSVVNVGGFKINTMDRGSSLTLGPYQQVDYFLSAKINQGFGEENGDFTPLVVPISN
CCCCCCEEECCCEEEEECCCCCCEEECCHHHHHEEEEEECCCCCCCCCCCCCEEEEECCC
VLDADLVDSNSAKNSVV
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377