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The map label for this gene is yoaK

Identifier: 16078924

GI number: 16078924

Start: 2033895

End: 2034572

Strand: Reverse

Name: yoaK

Synonym: BSU18640

Alternate gene names: 16078924

Gene position: 2034572-2033895 (Counterclockwise)

Preceding gene: 255767440

Following gene: 16078923

Centisome position: 48.26

GC content: 40.71

Gene sequence:

>678_bases
TTGACTGCAGCAGCTTATCGAAACACCTTGCTATCACTTTTATGTTTAACAGCTGGAATCGTGGATGTAATCGGGTATTT
AAGCCTGGGACATGTGTTCACAGCTAATATGACTGGAAACATTGTATTATTGGGGTTAGCTATCGGCAAATCCATTCAGG
TCACTGTTTTTAATTCCTTGACTGCGCTAATCGGATTTATATGCGGCGTGATCATTGCTACATTGATGGTCGGAAAGGCG
GAAAATACCCTTTGGCCTTCTGCTGTGACAAAAGCCCTCGCACTTGAAGCATTCATTTTGTTTGTCTTTGCTTGTCTTTC
TTTTTACCGGGCATTTGTTCCTGTGCACATTCTAATTATACTCATGAGCATTTCTATGGGGATTCAAACTACAGCAGCAA
AAAAACTGGGGATTGCAGGTATTTCTTCAACTGTGTTGACCGGCACTTTGGCTTCTCTTTTAGAGGATATATCCGGCCGT
TTGTTTTTTAAGAAGCAAAAGAAGACTTTCTTAAGAGATACTGTGTTAAGAGCACTGGCTATTATTTTGTATTGTGTAGG
GGCTATTATTGTTGCTCTGGCTGAGCCTGATTTTTATCACTTCATTATTTGGGTTCCGATTGTGCTGATCTTTGGCATCA
TGATGACAGCTAAGTTGAAACTGAGCGGGGAAAAATAG

Upstream 100 bases:

>100_bases
TAGGTTCTATCTTCCTAATTAATGTTGGGTTACTTAAAAAATAGAGATTGCGCCAAAAGACATACTAACAATTGAAATAG
AAGAAAGGATTGATACACCG

Downstream 100 bases:

>100_bases
CTTTTCCTGTATAGCTGTTATCAGGCCAACAGCCTGTTTCATTTCGTTATTGAAATGCGAATTTTGAGAGGGAAAAATAA
GACATTCGGCTGAAGTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTAAAYRNTLLSLLCLTAGIVDVIGYLSLGHVFTANMTGNIVLLGLAIGKSIQVTVFNSLTALIGFICGVIIATLMVGKA
ENTLWPSAVTKALALEAFILFVFACLSFYRAFVPVHILIILMSISMGIQTTAAKKLGIAGISSTVLTGTLASLLEDISGR
LFFKKQKKTFLRDTVLRALAIILYCVGAIIVALAEPDFYHFIIWVPIVLIFGIMMTAKLKLSGEK

Sequences:

>Translated_225_residues
MTAAAYRNTLLSLLCLTAGIVDVIGYLSLGHVFTANMTGNIVLLGLAIGKSIQVTVFNSLTALIGFICGVIIATLMVGKA
ENTLWPSAVTKALALEAFILFVFACLSFYRAFVPVHILIILMSISMGIQTTAAKKLGIAGISSTVLTGTLASLLEDISGR
LFFKKQKKTFLRDTVLRALAIILYCVGAIIVALAEPDFYHFIIWVPIVLIFGIMMTAKLKLSGEK
>Mature_224_residues
TAAAYRNTLLSLLCLTAGIVDVIGYLSLGHVFTANMTGNIVLLGLAIGKSIQVTVFNSLTALIGFICGVIIATLMVGKAE
NTLWPSAVTKALALEAFILFVFACLSFYRAFVPVHILIILMSISMGIQTTAAKKLGIAGISSTVLTGTLASLLEDISGRL
FFKKQKKTFLRDTVLRALAIILYCVGAIIVALAEPDFYHFIIWVPIVLIFGIMMTAKLKLSGEK

Specific function: Unknown

COG id: COG3619

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0700 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOAK_BACSU (O34343)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   E69896
- RefSeq:   NP_389745.1
- ProteinModelPortal:   O34343
- EnsemblBacteria:   EBBACT00000001880
- GeneID:   940007
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18640
- NMPDR:   fig|224308.1.peg.1867
- GenoList:   BSU18640
- GeneTree:   EBGT00050000001924
- HOGENOM:   HBG338009
- OMA:   AQRISHR
- ProtClustDB:   CLSK887386
- BioCyc:   BSUB:BSU18640-MONOMER
- InterPro:   IPR010699

Pfam domain/function: PF06912 DUF1275

EC number: NA

Molecular weight: Translated: 24164; Mature: 24033

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf6ecf70)-; HASH(0xfd57264)-; HASH(0xc0cf8c0)-; HASH(0xecb3884)-; HASH(0xd47ccf0)-; HASH(0xf825b50)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAYRNTLLSLLCLTAGIVDVIGYLSLGHVFTANMTGNIVLLGLAIGKSIQVTVFNSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCEEEEHHHHHH
TALIGFICGVIIATLMVGKAENTLWPSAVTKALALEAFILFVFACLSFYRAFVPVHILII
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMSISMGIQTTAAKKLGIAGISSTVLTGTLASLLEDISGRLFFKKQKKTFLRDTVLRALA
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
IILYCVGAIIVALAEPDFYHFIIWVPIVLIFGIMMTAKLKLSGEK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
TAAAYRNTLLSLLCLTAGIVDVIGYLSLGHVFTANMTGNIVLLGLAIGKSIQVTVFNSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCEEEEHHHHHH
TALIGFICGVIIATLMVGKAENTLWPSAVTKALALEAFILFVFACLSFYRAFVPVHILII
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMSISMGIQTTAAKKLGIAGISSTVLTGTLASLLEDISGRLFFKKQKKTFLRDTVLRALA
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
IILYCVGAIIVALAEPDFYHFIIWVPIVLIFGIMMTAKLKLSGEK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377