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The map label for this gene is exlX

Identifier: 16078923

GI number: 16078923

Start: 2032927

End: 2033625

Strand: Reverse

Name: exlX

Synonym: BSU18630

Alternate gene names: 16078923

Gene position: 2033625-2032927 (Counterclockwise)

Preceding gene: 16078924

Following gene: 255767438

Centisome position: 48.24

GC content: 44.78

Gene sequence:

>699_bases
ATGAAAAAGATCATGAGTGCATTTGTTGGTATGGTTTTGTTGACGATCTTCTGTTTTTCCCCGCAAGCTTCGGCAGCATA
TGACGACCTGCATGAAGGTTATGCAACGTATACAGGGTCAGGCTATTCAGGAGGAGCTTTCCTGCTGGATCCCATTCCTT
CCGATATGGAGATTACTGCAATAAATCCGGCGGATCTCAATTACGGAGGAGTAAAAGCGGCACTTGCCGGCTCTTATTTG
GAAGTTGAAGGGCCAAAAGGGAAAACAACCGTATATGTTACTGATCTTTATCCCGAAGGCGCTCGGGGAGCTCTTGATCT
GTCACCTAATGCCTTCCGTAAAATCGGCAATATGAAAGACGGAAAAATCAATATTAAATGGCGTGTTGTCAAAGCCCCAA
TCACCGGCAATTTCACGTACCGGATCAAAGAAGGCAGCAGCAGGTGGTGGGCAGCAATCCAAGTCAGAAATCACAAGTAT
CCTGTTATGAAAATGGAATATGAAAAGGATGGTAAGTGGATCAACATGGAGAAAATGGACTATAACCATTTTGTGAGTAC
GAATTTAGGTACTGGCTCTCTCAAAGTCAGAATGACTGACATCCGCGGAAAAGTTGTGAAAGACACCATTCCAAAGCTGC
CTGAAAGCGGAACGTCCAAAGCCTATACAGTACCGGGCCATGTTCAGTTTCCTGAATAA

Upstream 100 bases:

>100_bases
TAAAATCAACTATGAATCTATTTCCTCTTTCAAACCAGATGGATTGAGTCTTATAATGATAATGATTCTCATTTGAAGTC
TGGTTTGAGGAGGACCAAAT

Downstream 100 bases:

>100_bases
AAAATACGAAACAGCGGATCTTTTCCCGCTGTTTTTTCAATGTTCTGTATCTGCATGTAAAAATGTTTTAATCATGTTCA
ACTGCTCCTGCTTTGGATAA

Product: extracellular endoglucanase precursor (expansin)

Products: NA

Alternate protein names: EXLX1

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKIMSAFVGMVLLTIFCFSPQASAAYDDLHEGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYL
EVEGPKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY
PVMKMEYEKDGKWINMEKMDYNHFVSTNLGTGSLKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQFPE

Sequences:

>Translated_232_residues
MKKIMSAFVGMVLLTIFCFSPQASAAYDDLHEGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYL
EVEGPKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY
PVMKMEYEKDGKWINMEKMDYNHFVSTNLGTGSLKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQFPE
>Mature_232_residues
MKKIMSAFVGMVLLTIFCFSPQASAAYDDLHEGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYL
EVEGPKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY
PVMKMEYEKDGKWINMEKMDYNHFVSTNLGTGSLKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQFPE

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG4305

COG function: function code G; Endoglucanase C-terminal domain/subunit and related proteins

Gene ontology:

Cell location: Secreted, cell wall

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOAJ_BACSU (O34918)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   D69896
- RefSeq:   NP_389744.1
- PDB:   2BH0
- PDB:   3D30
- PDBsum:   2BH0
- PDBsum:   3D30
- ProteinModelPortal:   O34918
- SMR:   O34918
- EnsemblBacteria:   EBBACT00000000993
- GeneID:   940108
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18630
- NMPDR:   fig|224308.1.peg.1866
- GenoList:   BSU18630
- GeneTree:   EBGT00050000006365
- HOGENOM:   HBG417860
- OMA:   KTDYNHF
- ProtClustDB:   CLSK398181
- BioCyc:   BSUB:BSU18630-MONOMER
- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117
- Gene3D:   G3DSA:2.40.40.10

Pfam domain/function: PF03330 DPBB_1; SSF50685 Barwin_like; SSF49590 Expan_Lol_pI_C

EC number: NA

Molecular weight: Translated: 25638; Mature: 25638

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50842 EXPANSIN_EG45

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIMSAFVGMVLLTIFCFSPQASAAYDDLHEGYATYTGSGYSGGAFLLDPIPSDMEITA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEECCCCCCCCEEEECCCCCCCEEEE
INPADLNYGGVKAALAGSYLEVEGPKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKD
ECCCCCCCCCEEHEECCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCHHHHHHCCCCC
GKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKYPVMKMEYEKDGKWINMEKMD
CEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECC
YNHFVSTNLGTGSLKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQFPE
CCEEEECCCCCCEEEEEEECCCCEEHHHHHCCCCCCCCCCEEECCCEEECCC
>Mature Secondary Structure
MKKIMSAFVGMVLLTIFCFSPQASAAYDDLHEGYATYTGSGYSGGAFLLDPIPSDMEITA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEECCCCCCCCEEEECCCCCCCEEEE
INPADLNYGGVKAALAGSYLEVEGPKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKD
ECCCCCCCCCEEHEECCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCHHHHHHCCCCC
GKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKYPVMKMEYEKDGKWINMEKMD
CEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECC
YNHFVSTNLGTGSLKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQFPE
CCEEEECCCCCCEEEEEEECCCCEEHHHHHCCCCCCCCCCEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377