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The map label for this gene is yoaB

Identifier: 16078915

GI number: 16078915

Start: 2021223

End: 2022467

Strand: Reverse

Name: yoaB

Synonym: BSU18540

Alternate gene names: 16078915

Gene position: 2022467-2021223 (Counterclockwise)

Preceding gene: 16078916

Following gene: 16078911

Centisome position: 47.98

GC content: 45.62

Gene sequence:

>1245_bases
ATGTTGGATAAAATAGGAATACCGAAGCGGCTTGCCTGGGGATTTTTAGGGGTTGTTTTGTTTATGATGGGAGATGGCCT
TGAACAAGGCTGGCTCAGTCCTTTTTTGATCGAAAACGGGCTCACCGTTCAGCAGTCCGCTTCCATTTTTAGTATATACG
GAATTGCGCTTGCCATAGCTTCCTGGTTTTCGGGTGTATGTCTCGAAGCATTTGGCGCAAAACGAACGATGTTTATGGGG
CTGTTGTTTTATGTGATCGGTACAGCTGCTTTTATCGTATTTGGATTTGAACAGCTGAACCTGCCAGTGATGTATGTGAC
TTACTTCGTAAAAGGGTTAGGTTACCCGCTTTTTGCTTATTCTTTCTTGACATGGGTCATTTACAGAACACCGCAAAGCA
AACTGAGCACTGCTGTCGGCTGGTTTTGGATTGCATATTGCCTCGGCATGTTTGTGTTCGGCGCTTGGTACTCAAGCTAC
GCGATCAAAGCGTTCGGTTATTTGAATACGCTTTGGAGCTCTATTTTCTGGGTATGTCTCGGTGCATTCTTTGCATTGTT
TATCAATAAAGACCGTTTTGAAAAGAAGAAAAGAAAAAGATCAGAAACAGCCGAGGAGCTTTTAAAAGGGGTTACGATTC
TATTTACAAATCCGCGCGTGCTTACAGGCGGAATCATCAGAATCATCAACAGCATTGGTACATATGGTTTTCCAGTCTTT
TTGCCGATGCACATGGCCCAGCATGGAATTTCAACCAATGTGTGGCTGCAAATTTGGGGAACGATTTTCCTGGGGAACAT
TGTGTTTAACCTTATCTTCGGTATTGTCGGCGATAAATTCGGCTGGAAAAATACTGTTATTTGGTTCGGCGGAGTCGGCT
GCGGCATTTTCACCGTCTTATTATACTACGCACCTGTTTTCTCCGGCGGAAGTTTAGCGGTTGTCAGCGTGATCGGCTTT
ATTTGGGGCGGTTTGCTGGCAGGCTATGTGCCGATTGGTGCAATTGTGCCGACGGTGGCAGGAAAAGATAAAGGGGCAGC
CATGTCTGTATTGAATTTAGCTGCAGGTTTATCAGCGTTTGTCGGCCCTGCACTCGCTTGGCTGTTCATCGGTCTCGTCG
GCGCGCAAGGTGTCGTCTGGATCTTTGCGGCCCTTTACCTTGCAAGTGCGGTCTTGACAAAATGTATTCATATACCTGAG
GAAAAAGCAGTTAAGGAGGAAACATCTCCTCAATATGCATCTTAA

Upstream 100 bases:

>100_bases
AATTTAAGACGGAATTTCTGCTGTTTTGAGGAATCATTTAATTTTCAACTTTAATAAGGTAATACGGTAATGAATAATAG
CATCTAAGGAGGAGACAGAT

Downstream 100 bases:

>100_bases
TTAGAAAGCGCCCTGTTTGAGGGGCGCTTTTTATCTTTTTAAAGGAAAAGGGATGTGGCACAGACCAAGAGAATACCGTC
ATTCTCTTGGTTTCACAATA

Product: negatively charged metabolite transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MLDKIGIPKRLAWGFLGVVLFMMGDGLEQGWLSPFLIENGLTVQQSASIFSIYGIALAIASWFSGVCLEAFGAKRTMFMG
LLFYVIGTAAFIVFGFEQLNLPVMYVTYFVKGLGYPLFAYSFLTWVIYRTPQSKLSTAVGWFWIAYCLGMFVFGAWYSSY
AIKAFGYLNTLWSSIFWVCLGAFFALFINKDRFEKKKRKRSETAEELLKGVTILFTNPRVLTGGIIRIINSIGTYGFPVF
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGIVGDKFGWKNTVIWFGGVGCGIFTVLLYYAPVFSGGSLAVVSVIGF
IWGGLLAGYVPIGAIVPTVAGKDKGAAMSVLNLAAGLSAFVGPALAWLFIGLVGAQGVVWIFAALYLASAVLTKCIHIPE
EKAVKEETSPQYAS

Sequences:

>Translated_414_residues
MLDKIGIPKRLAWGFLGVVLFMMGDGLEQGWLSPFLIENGLTVQQSASIFSIYGIALAIASWFSGVCLEAFGAKRTMFMG
LLFYVIGTAAFIVFGFEQLNLPVMYVTYFVKGLGYPLFAYSFLTWVIYRTPQSKLSTAVGWFWIAYCLGMFVFGAWYSSY
AIKAFGYLNTLWSSIFWVCLGAFFALFINKDRFEKKKRKRSETAEELLKGVTILFTNPRVLTGGIIRIINSIGTYGFPVF
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGIVGDKFGWKNTVIWFGGVGCGIFTVLLYYAPVFSGGSLAVVSVIGF
IWGGLLAGYVPIGAIVPTVAGKDKGAAMSVLNLAAGLSAFVGPALAWLFIGLVGAQGVVWIFAALYLASAVLTKCIHIPE
EKAVKEETSPQYAS
>Mature_414_residues
MLDKIGIPKRLAWGFLGVVLFMMGDGLEQGWLSPFLIENGLTVQQSASIFSIYGIALAIASWFSGVCLEAFGAKRTMFMG
LLFYVIGTAAFIVFGFEQLNLPVMYVTYFVKGLGYPLFAYSFLTWVIYRTPQSKLSTAVGWFWIAYCLGMFVFGAWYSSY
AIKAFGYLNTLWSSIFWVCLGAFFALFINKDRFEKKKRKRSETAEELLKGVTILFTNPRVLTGGIIRIINSIGTYGFPVF
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGIVGDKFGWKNTVIWFGGVGCGIFTVLLYYAPVFSGGSLAVVSVIGF
IWGGLLAGYVPIGAIVPTVAGKDKGAAMSVLNLAAGLSAFVGPALAWLFIGLVGAQGVVWIFAALYLASAVLTKCIHIPE
EKAVKEETSPQYAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. CsbX subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOAB_BACSU (O34864)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   D69895
- RefSeq:   NP_389736.1
- ProteinModelPortal:   O34864
- EnsemblBacteria:   EBBACT00000000017
- GeneID:   940099
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18540
- NMPDR:   fig|224308.1.peg.1858
- GenoList:   BSU18540
- GeneTree:   EBGT00050000000135
- HOGENOM:   HBG431617
- OMA:   FNLIFGA
- ProtClustDB:   CLSK887379
- BioCyc:   BSUB:BSU18540-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004748
- TIGRFAMs:   TIGR00897

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 45377; Mature: 45377

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfb427ec)-; HASH(0xf4076b8)-; HASH(0xf6c3b50)-; HASH(0x10062b9c)-; HASH(0xf92378c)-; HASH(0xeeba66c)-; HASH(0xf940f88)-; HASH(0xf70c460)-; HASH(0xeabbc2c)-; HASH(0xdee9e70)-; HASH(0xfa346e4)-; HASH(0xeb404d0)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCH
>Mature Secondary Structure
MLDKIGIPKRLAWGFLGVVLFMMGDGLEQGWLSPFLIENGLTVQQSASIFSIYGIALAIA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHCCCCCHHHCCHHHHHHHHHHHHH
SWFSGVCLEAFGAKRTMFMGLLFYVIGTAAFIVFGFEQLNLPVMYVTYFVKGLGYPLFAY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH
SFLTWVIYRTPQSKLSTAVGWFWIAYCLGMFVFGAWYSSYAIKAFGYLNTLWSSIFWVCL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFFALFINKDRFEKKKRKRSETAEELLKGVTILFTNPRVLTGGIIRIINSIGTYGFPVF
HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHH
LPMHMAQHGISTNVWLQIWGTIFLGNIVFNLIFGIVGDKFGWKNTVIWFGGVGCGIFTVL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH
LYYAPVFSGGSLAVVSVIGFIWGGLLAGYVPIGAIVPTVAGKDKGAAMSVLNLAAGLSAF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VGPALAWLFIGLVGAQGVVWIFAALYLASAVLTKCIHIPEEKAVKEETSPQYAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377