Click here to switch to the map view.

The map label for this gene is yneR

Identifier: 16078867

GI number: 16078867

Start: 1931545

End: 1931832

Strand: Reverse

Name: yneR

Synonym: BSU18060

Alternate gene names: 16078867

Gene position: 1931832-1931545 (Counterclockwise)

Preceding gene: 16078868

Following gene: 16078862

Centisome position: 45.83

GC content: 43.4

Gene sequence:

>288_bases
ATGAATATGACAATTAACGAAGACGCATTGAACTGGTATAAAGAAGAACTCGATTTGGAAAGCGGAGACCAGGTTCGCTT
TTTCGTCCGCTATGGAGGCTGCAGCAACGTTCAAAAGGGTTTTTCTCTCGGTGTAGCGAAAGATGCCCCACAAGAGGCTG
GAGTCACTGCAGAAGCTGATGGCATTACCTTCTTTATTGAAGAAAGTGATTTATGGTACTTTGATAACCACGACCTTCTC
GTCAGCTATTCAGAAGACGCTGATGAACCGGTTTTTGAATACCAATAA

Upstream 100 bases:

>100_bases
AAAATGGTTATAAGCTTAAAAAACTTCTCTTTTGACACAGAATAGCCTAATACGTTTATAATAGAGAAAATTCAAATGAA
GAACAAAGGGGTGTTCTGTT

Downstream 100 bases:

>100_bases
AAAAGAACGCACTTCATGTGCGTTCTTTTTTTACAAATGAAATCGTATAAGATGATCGGTTAGGTTTTCTTGTTCCAAAA
TATATTTTTGTGTTTCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MNMTINEDALNWYKEELDLESGDQVRFFVRYGGCSNVQKGFSLGVAKDAPQEAGVTAEADGITFFIEESDLWYFDNHDLL
VSYSEDADEPVFEYQ

Sequences:

>Translated_95_residues
MNMTINEDALNWYKEELDLESGDQVRFFVRYGGCSNVQKGFSLGVAKDAPQEAGVTAEADGITFFIEESDLWYFDNHDLL
VSYSEDADEPVFEYQ
>Mature_95_residues
MNMTINEDALNWYKEELDLESGDQVRFFVRYGGCSNVQKGFSLGVAKDAPQEAGVTAEADGITFFIEESDLWYFDNHDLL
VSYSEDADEPVFEYQ

Specific function: Unknown

COG id: COG4841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNER_BACSU (Q45063)

Other databases:

- EMBL:   Z73234
- EMBL:   AL009126
- PIR:   H69891
- RefSeq:   NP_389688.1
- ProteinModelPortal:   Q45063
- SMR:   Q45063
- EnsemblBacteria:   EBBACT00000002847
- GeneID:   938132
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18060
- NMPDR:   fig|224308.1.peg.1809
- GenoList:   BSU18060
- GeneTree:   EBGT00050000002462
- HOGENOM:   HBG313516
- OMA:   VRFFVRY
- ProtClustDB:   CLSK887358
- BioCyc:   BSUB:BSU18060-MONOMER
- InterPro:   IPR000361
- InterPro:   IPR008326
- Gene3D:   G3DSA:2.60.300.12
- PIRSF:   PIRSF034852

Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like

EC number: NA

Molecular weight: Translated: 10833; Mature: 10833

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTINEDALNWYKEELDLESGDQVRFFVRYGGCSNVQKGFSLGVAKDAPQEAGVTAEAD
CCCEECHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC
GITFFIEESDLWYFDNHDLLVSYSEDADEPVFEYQ
CEEEEEECCCEEEECCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNMTINEDALNWYKEELDLESGDQVRFFVRYGGCSNVQKGFSLGVAKDAPQEAGVTAEAD
CCCEECHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC
GITFFIEESDLWYFDNHDLLVSYSEDADEPVFEYQ
CEEEEEECCCEEEECCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377