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The map label for this gene is yneN

Identifier: 16078864

GI number: 16078864

Start: 1929481

End: 1929993

Strand: Direct

Name: yneN

Synonym: BSU18010

Alternate gene names: 16078864

Gene position: 1929481-1929993 (Clockwise)

Preceding gene: 16078863

Following gene: 255767423

Centisome position: 45.77

GC content: 40.74

Gene sequence:

>513_bases
ATGCTGAAAAAATGGCTCGCAGGGATCCTGCTTATCATGCTAGTCGGTTATACGGGATGGAATTTATATCAAACATACAG
CAAAAAAGAAGTCGGAATTCAAGAGGGGCAACAAGCACCTGATTTTTCTTTGAAAACGCTATCAGGAGAGAAAAGCTCTT
TACAGGATGCAAAAGGCAAAAAAGTGCTGCTCAATTTTTGGGCAACTTGGTGTAAGCCGTGCCGTCAGGAAATGCCTGCG
ATGGAAAAGCTGCAAAAAGAGTACGCCGACAAACTTGCGGTTGTTGCGGTAAATTTCACTTCAGCTGAGAAAAGTGAGAA
ACAGGTCCGAGCGTTTGCTGATACTTATGACTTAACGTTCCCCATTCTGATTGATAAAAAAGGGATCAATGCTGACTATA
ACGTGATGTCATATCCAACGACATATATCTTAGATGAAAAAGGTGTTATCCAAGACATACATGTTGGCACCATGACAAAA
AAAGAAATGGAACAAAAACTGGATCTTGATTAG

Upstream 100 bases:

>100_bases
TGCTTCGTGAAAAAATGAAGCAGTCCTGATGAATCAATAGGAAGAGAAGGCATTTCGCTTTCTCTTCTTTTTATGACACA
ATGTGCTGCGGAGGTGGCAT

Downstream 100 bases:

>100_bases
ATTCAGTTTTTTTTATACTCAAATATGCTTACAAGTTTTCAGAATTGGAAAAAATAAAAGAATATGCGGAGGTGAGAAGC
GTGAAGAAGATGAGAAAACG

Product: membrane-bound proteins with a thioredoxin-like domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLKKWLAGILLIMLVGYTGWNLYQTYSKKEVGIQEGQQAPDFSLKTLSGEKSSLQDAKGKKVLLNFWATWCKPCRQEMPA
MEKLQKEYADKLAVVAVNFTSAEKSEKQVRAFADTYDLTFPILIDKKGINADYNVMSYPTTYILDEKGVIQDIHVGTMTK
KEMEQKLDLD

Sequences:

>Translated_170_residues
MLKKWLAGILLIMLVGYTGWNLYQTYSKKEVGIQEGQQAPDFSLKTLSGEKSSLQDAKGKKVLLNFWATWCKPCRQEMPA
MEKLQKEYADKLAVVAVNFTSAEKSEKQVRAFADTYDLTFPILIDKKGINADYNVMSYPTTYILDEKGVIQDIHVGTMTK
KEMEQKLDLD
>Mature_170_residues
MLKKWLAGILLIMLVGYTGWNLYQTYSKKEVGIQEGQQAPDFSLKTLSGEKSSLQDAKGKKVLLNFWATWCKPCRQEMPA
MEKLQKEYADKLAVVAVNFTSAEKSEKQVRAFADTYDLTFPILIDKKGINADYNVMSYPTTYILDEKGVIQDIHVGTMTK
KEMEQKLDLD

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain

Homologues:

Organism=Escherichia coli, GI1788523, Length=137, Percent_Identity=29.9270072992701, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNEN_BACSU (O31820)

Other databases:

- EMBL:   AL009126
- PIR:   E69891
- RefSeq:   NP_389684.1
- HSSP:   P35160
- ProteinModelPortal:   O31820
- SMR:   O31820
- EnsemblBacteria:   EBBACT00000000264
- GeneID:   938193
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18010
- NMPDR:   fig|224308.1.peg.1805
- GenoList:   BSU18010
- GeneTree:   EBGT00050000000761
- HOGENOM:   HBG493509
- OMA:   TTYILDE
- ProtClustDB:   CLSK887357
- BioCyc:   BSUB:BSU18010-MONOMER
- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10
- PANTHER:   PTHR10438

Pfam domain/function: PF00578 AhpC-TSA; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 19373; Mature: 19373

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS00194 THIOREDOXIN_1; PS51352 THIOREDOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf713320)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKWLAGILLIMLVGYTGWNLYQTYSKKEVGIQEGQQAPDFSLKTLSGEKSSLQDAKGK
CHHHHHHHHHHHHHHCCCCCHHHHHHCCHHCCHHCCCCCCCCEEEECCCCHHHHHHCCCC
KVLLNFWATWCKPCRQEMPAMEKLQKEYADKLAVVAVNFTSAEKSEKQVRAFADTYDLTF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCEE
PILIDKKGINADYNVMSYPTTYILDEKGVIQDIHVGTMTKKEMEQKLDLD
EEEEECCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCHHHHHHHCCCH
>Mature Secondary Structure
MLKKWLAGILLIMLVGYTGWNLYQTYSKKEVGIQEGQQAPDFSLKTLSGEKSSLQDAKGK
CHHHHHHHHHHHHHHCCCCCHHHHHHCCHHCCHHCCCCCCCCEEEECCCCHHHHHHCCCC
KVLLNFWATWCKPCRQEMPAMEKLQKEYADKLAVVAVNFTSAEKSEKQVRAFADTYDLTF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCEE
PILIDKKGINADYNVMSYPTTYILDEKGVIQDIHVGTMTKKEMEQKLDLD
EEEEECCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377