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The map label for this gene is fliP

Identifier: 16078698

GI number: 16078698

Start: 1704863

End: 1705528

Strand: Direct

Name: fliP

Synonym: BSU16350

Alternate gene names: 16078698

Gene position: 1704863-1705528 (Clockwise)

Preceding gene: 16078697

Following gene: 16078699

Centisome position: 40.44

GC content: 36.64

Gene sequence:

>666_bases
ATGAATGAGTTTATAAATATTTTCAGTTCAAGCGATCCGGAAAACGTAAGTTCGACTGTTAAATTACTATTATTGTTAAC
TGTATTTTCAGTGGCGCCTGGAATATTGATTCTTATGACTTGTTTTACTCGCATCGTCATTGTTCTGTCATTTGTCAGAA
CTTCACTTGCGACGCAATCTATGCCCCCAAACCAGGTTCTAATCGGGCTTGCGCTGTTTTTAACATTTTTTATTATGGCT
CCTACTTTTTCAGAAATTAATAAAGAAGCGCTGACCCCATTAATGGACAACAAAATCAGCTTGGATGAAGCGTATACGAA
AGCTGAGGAACCGATTAAAGAATTTATGAGTAAACACACAAGGCAGAAGGATCTGGCGCTGTTTATGAATTACGCGAAAA
TGGATAAACCTGAATCATTAAAGGATATTCCGTTAACAACAATGGTTCCGGCTTTTGCCATATCGGAGCTTAAAACAGCA
TTTCAAATAGGTTTTATGATTTTTATCCCTTTTTTAATTATAGATATGGTAGTGGCGAGCGTCTTGATGTCAATGGGAAT
GATGATGCTGCCTCCAGTTATGATTTCTCTGCCCTTTAAAATATTACTTTTTGTTTTGGTAGACGGCTGGTATTTAATTG
TGAAATCTTTGCTTCAGAGCTTTTAG

Upstream 100 bases:

>100_bases
CCGCAGCAAAAACTGCCTTCATTTTCAAAAGCATTAAAAGAGCAACTTGAAGAGTTAAAACAAAACCGTTCTGAAGGAAA
GAAGAAAGGCCCACGTCATC

Downstream 100 bases:

>100_bases
GGTAGGTGCTAAACGTGAGTTCAGAATTTGTAATTTCTATGGCGGAAAAAGCCGTATACGTAACGCTGATGATCAGCGGG
CCATTATTGGCTATTGCTTT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNEFINIFSSSDPENVSSTVKLLLLLTVFSVAPGILILMTCFTRIVIVLSFVRTSLATQSMPPNQVLIGLALFLTFFIMA
PTFSEINKEALTPLMDNKISLDEAYTKAEEPIKEFMSKHTRQKDLALFMNYAKMDKPESLKDIPLTTMVPAFAISELKTA
FQIGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF

Sequences:

>Translated_221_residues
MNEFINIFSSSDPENVSSTVKLLLLLTVFSVAPGILILMTCFTRIVIVLSFVRTSLATQSMPPNQVLIGLALFLTFFIMA
PTFSEINKEALTPLMDNKISLDEAYTKAEEPIKEFMSKHTRQKDLALFMNYAKMDKPESLKDIPLTTMVPAFAISELKTA
FQIGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF
>Mature_221_residues
MNEFINIFSSSDPENVSSTVKLLLLLTVFSVAPGILILMTCFTRIVIVLSFVRTSLATQSMPPNQVLIGLALFLTFFIMA
PTFSEINKEALTPLMDNKISLDEAYTKAEEPIKEFMSKHTRQKDLALFMNYAKMDKPESLKDIPLTTMVPAFAISELKTA
FQIGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF

Specific function: Plays a role in the flagellum-specific transport system

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family

Homologues:

Organism=Escherichia coli, GI1788259, Length=208, Percent_Identity=53.8461538461538, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIP_BACSU (P35528)

Other databases:

- EMBL:   M87005
- EMBL:   AL009126
- PIR:   C41886
- RefSeq:   NP_389517.1
- ProteinModelPortal:   P35528
- EnsemblBacteria:   EBBACT00000000141
- GeneID:   940095
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16350
- NMPDR:   fig|224308.1.peg.1638
- GenoList:   BSU16350
- GeneTree:   EBGT00050000001810
- HOGENOM:   HBG414116
- OMA:   MMTGFTR
- PhylomeDB:   P35528
- ProtClustDB:   PRK05699
- BioCyc:   BSUB:BSU16350-MONOMER
- InterPro:   IPR005837
- InterPro:   IPR005838
- PRINTS:   PR00951
- PRINTS:   PR01302
- TIGRFAMs:   TIGR01103

Pfam domain/function: PF00813 FliP

EC number: NA

Molecular weight: Translated: 24856; Mature: 24856

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS01060 FLIP_1; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf12a950)-; HASH(0xeb1dcdc)-; HASH(0xf321124)-; HASH(0xf2de460)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFINIFSSSDPENVSSTVKLLLLLTVFSVAPGILILMTCFTRIVIVLSFVRTSLATQS
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPPNQVLIGLALFLTFFIMAPTFSEINKEALTPLMDNKISLDEAYTKAEEPIKEFMSKHT
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RQKDLALFMNYAKMDKPESLKDIPLTTMVPAFAISELKTAFQIGFMIFIPFLIIDMVVAS
HHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MNEFINIFSSSDPENVSSTVKLLLLLTVFSVAPGILILMTCFTRIVIVLSFVRTSLATQS
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPPNQVLIGLALFLTFFIMAPTFSEINKEALTPLMDNKISLDEAYTKAEEPIKEFMSKHT
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RQKDLALFMNYAKMDKPESLKDIPLTTMVPAFAISELKTAFQIGFMIFIPFLIIDMVVAS
HHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377