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The map label for this gene is fliM

Identifier: 16078694

GI number: 16078694

Start: 1701684

End: 1702682

Strand: Direct

Name: fliM

Synonym: BSU16310

Alternate gene names: 16078694

Gene position: 1701684-1702682 (Clockwise)

Preceding gene: 16078693

Following gene: 16078695

Centisome position: 40.37

GC content: 40.94

Gene sequence:

>999_bases
ATGTCAGGAGAAGTTCTCTCCCAAAATGAAATAGATGCACTGCTCTCTGCAATATCAACTGGTGAAATGGACGCTGAAGA
GCTGAAAAAAGAAGAAAAAGAGAAGAAAGTCAAGGTTTATGATTTCAAACGTGCGCTGCGGTTTTCTAAGGATCAGATCC
GCAGTTTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACCACTCATTTTTCTGCTCAGCTCAGAACCTATATTCAC
ATATCTGTCAGTTCTGTTGATCAGGTTCCGTATGAGGAATTTATCAGATCGATTCCAAACATGACGATTCTGAATCTATT
TGATGTTCATCCGATGGAAGGAAGAATTATGATGGAGGTCAACCCCACGATAGCTTATACGATGATGGATCGAGTCATGG
GCGGGATTGGAATCAGTCATAACAAGGTTGACAGTTTGACAGAAATTGAAACAAAAATCATTTCTAATTTATTTGAAAAT
GCACTGGGTAATTATAAAGAAGCTTGGCAGTCAATTGCTGATATTGAACCGGAAATGACTGAGTTTGAAGTGAATCCGCA
ATTTGTTCAGATGGTATCTCCTAATGAAACAGTCGTGGTGATCTCGCTCAATACTCAAATTGGTGAAATCAGCGGTGTCA
TTAATCTCTGTATCCCGCATATTGTACTCGAGCCGCTCATACCGAAGCTTTCAGTCCACTATTGGATGCAATCAGACCGA
AATGAGCCAAAGCCTGAGGAAACAAAGTCGCTTGAAAAACGTATCATGACAGCACAAATACCTGTCGTGGCCGAGCTCGG
CACATCTGAACTGACGATAGAAGAGTTTTTAAGTTTAGAAGTCGGAGACTGCATAACTTTGGACAAATCAGTCACGGATC
CTCTTACTGTATTGGTCGGAGATAAGCCGAAATTTTTAGGACAAGCCGGCCGGGTGAATCGAAAACAGGCAGTGCAAATT
TTAGATCACGACATAAGAGGTGAACAAGATGGAGAATAA

Upstream 100 bases:

>100_bases
AATAAATAGCTACCTCCAAGAAGGAAAAGTAGAAAAAGTGTATATTACCTCCTTTAATCTGCAATAAAGCATAATTTGAC
AGAATACGGAGGTGAGGAAA

Downstream 100 bases:

>100_bases
TAGATTATCTCAAGATGAGATTGACGCGCTTCTTAACGGTACTGGCAGCACGCTTGATGAGCCAGAGATTCCGGAAGTAG
ATGACTTATCGGAAATGGAG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSGEVLSQNEIDALLSAISTGEMDAEELKKEEKEKKVKVYDFKRALRFSKDQIRSLTRIHDNFARLLTTHFSAQLRTYIH
ISVSSVDQVPYEEFIRSIPNMTILNLFDVHPMEGRIMMEVNPTIAYTMMDRVMGGIGISHNKVDSLTEIETKIISNLFEN
ALGNYKEAWQSIADIEPEMTEFEVNPQFVQMVSPNETVVVISLNTQIGEISGVINLCIPHIVLEPLIPKLSVHYWMQSDR
NEPKPEETKSLEKRIMTAQIPVVAELGTSELTIEEFLSLEVGDCITLDKSVTDPLTVLVGDKPKFLGQAGRVNRKQAVQI
LDHDIRGEQDGE

Sequences:

>Translated_332_residues
MSGEVLSQNEIDALLSAISTGEMDAEELKKEEKEKKVKVYDFKRALRFSKDQIRSLTRIHDNFARLLTTHFSAQLRTYIH
ISVSSVDQVPYEEFIRSIPNMTILNLFDVHPMEGRIMMEVNPTIAYTMMDRVMGGIGISHNKVDSLTEIETKIISNLFEN
ALGNYKEAWQSIADIEPEMTEFEVNPQFVQMVSPNETVVVISLNTQIGEISGVINLCIPHIVLEPLIPKLSVHYWMQSDR
NEPKPEETKSLEKRIMTAQIPVVAELGTSELTIEEFLSLEVGDCITLDKSVTDPLTVLVGDKPKFLGQAGRVNRKQAVQI
LDHDIRGEQDGE
>Mature_331_residues
SGEVLSQNEIDALLSAISTGEMDAEELKKEEKEKKVKVYDFKRALRFSKDQIRSLTRIHDNFARLLTTHFSAQLRTYIHI
SVSSVDQVPYEEFIRSIPNMTILNLFDVHPMEGRIMMEVNPTIAYTMMDRVMGGIGISHNKVDSLTEIETKIISNLFENA
LGNYKEAWQSIADIEPEMTEFEVNPQFVQMVSPNETVVVISLNTQIGEISGVINLCIPHIVLEPLIPKLSVHYWMQSDRN
EPKPEETKSLEKRIMTAQIPVVAELGTSELTIEEFLSLEVGDCITLDKSVTDPLTVLVGDKPKFLGQAGRVNRKQAVQIL
DHDIRGEQDGE

Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family

Homologues:

Organism=Escherichia coli, GI1788255, Length=323, Percent_Identity=29.4117647058824, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIM_BACSU (P23453)

Other databases:

- EMBL:   M37691
- EMBL:   AL009126
- EMBL:   X56049
- EMBL:   M86738
- PIR:   B39136
- RefSeq:   NP_389513.1
- ProteinModelPortal:   P23453
- EnsemblBacteria:   EBBACT00000003940
- GeneID:   939518
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16310
- NMPDR:   fig|224308.1.peg.1634
- GenoList:   BSU16310
- GeneTree:   EBGT00050000001644
- HOGENOM:   HBG579155
- OMA:   QTEQRII
- PhylomeDB:   P23453
- ProtClustDB:   PRK06666
- BioCyc:   BSUB:BSU16310-MONOMER
- GO:   GO:0006935
- InterPro:   IPR001689
- InterPro:   IPR001543
- PRINTS:   PR00955
- TIGRFAMs:   TIGR01397

Pfam domain/function: PF02154 FliM; PF01052 SpoA; SSF101801 SpoA

EC number: NA

Molecular weight: Translated: 37530; Mature: 37398

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEVLSQNEIDALLSAISTGEMDAEELKKEEKEKKVKVYDFKRALRFSKDQIRSLTRIH
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
DNFARLLTTHFSAQLRTYIHISVSSVDQVPYEEFIRSIPNMTILNLFDVHPMEGRIMMEV
HHHHHHHHHHHHHEEEEEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEE
NPTIAYTMMDRVMGGIGISHNKVDSLTEIETKIISNLFENALGNYKEAWQSIADIEPEMT
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH
EFEVNPQFVQMVSPNETVVVISLNTQIGEISGVINLCIPHIVLEPLIPKLSVHYWMQSDR
EEECCHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NEPKPEETKSLEKRIMTAQIPVVAELGTSELTIEEFLSLEVGDCITLDKSVTDPLTVLVG
CCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC
DKPKFLGQAGRVNRKQAVQILDHDIRGEQDGE
CCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SGEVLSQNEIDALLSAISTGEMDAEELKKEEKEKKVKVYDFKRALRFSKDQIRSLTRIH
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
DNFARLLTTHFSAQLRTYIHISVSSVDQVPYEEFIRSIPNMTILNLFDVHPMEGRIMMEV
HHHHHHHHHHHHHEEEEEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEE
NPTIAYTMMDRVMGGIGISHNKVDSLTEIETKIISNLFENALGNYKEAWQSIADIEPEMT
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH
EFEVNPQFVQMVSPNETVVVISLNTQIGEISGVINLCIPHIVLEPLIPKLSVHYWMQSDR
EEECCHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NEPKPEETKSLEKRIMTAQIPVVAELGTSELTIEEFLSLEVGDCITLDKSVTDPLTVLVG
CCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC
DKPKFLGQAGRVNRKQAVQILDHDIRGEQDGE
CCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1898932; 9384377; 1828465; 1447979