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The map label for this gene is flgC

Identifier: 16078682

GI number: 16078682

Start: 1691667

End: 1692119

Strand: Direct

Name: flgC

Synonym: BSU16190

Alternate gene names: 16078682

Gene position: 1691667-1692119 (Clockwise)

Preceding gene: 16078681

Following gene: 16078683

Centisome position: 40.13

GC content: 42.6

Gene sequence:

>453_bases
ATGACAGCTTTTCATAGCTTAAATGTTTCAGCATCGGCTTTAACAGCTCAGCGAGTCAGAATGGACGTTGTATCATCTAA
CTTAGCAAATATGGATACGACAAGAGCTAAGCAGGTGAATGGAGAGTGGGTGCCTTACAGAAGAAAAATGGTTTCCCTTC
AGTCAAAAGGTGAATCGTTCTCTTCCATTCTCAATTCTCAAATGAGCGGAAGCGGGAATGCTGGAAACGGTGTGAAGGTT
TCAAAAATTACGGAGGATGATTCGGATTTTAATCTTGTCTATGATCCGACAGACCCTGATGCAAACGCTGAAGGATATGT
ACAAAAGCCTAATGTTGATCCATTAAAGGAAATGGTTGATCTTGTCAGCAGCACTAGATCATACGAGGCGAATGTCACGG
CGATGAATGCCACAAAGGGAATGCTGATGAAGGCGTTAGAAATCGGAAAGTAG

Upstream 100 bases:

>100_bases
TGACAGAATTGGCGCAAAATCAAATCAACTATCAAGCTTTGGTTGAAAGAATGAACGGTAAATTTAATTCGCTGAAGACC
GTATTAACAGGAGGAAAATG

Downstream 100 bases:

>100_bases
GTGAATGAATGTGATTAATGCAATTTCTCCTTTTCAGGTTCAAAATACTCAAAACACTCAAAATGCAACAAATCAAGTAA
ACAATAGCCAAAAAACAGAT

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKV
SKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKALEIGK

Sequences:

>Translated_150_residues
MTAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKV
SKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKALEIGK
>Mature_149_residues
TAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKVS
KITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKALEIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family

Homologues:

Organism=Escherichia coli, GI1787314, Length=150, Percent_Identity=39.3333333333333, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGC_BACSU (P24501)

Other databases:

- EMBL:   M54965
- EMBL:   AL009126
- PIR:   JG0020
- RefSeq:   NP_389501.1
- ProteinModelPortal:   P24501
- EnsemblBacteria:   EBBACT00000004076
- GeneID:   938646
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16190
- NMPDR:   fig|224308.1.peg.1621
- GenoList:   BSU16190
- GeneTree:   EBGT00050000002755
- HOGENOM:   HBG700631
- OMA:   NIISATR
- PhylomeDB:   P24501
- ProtClustDB:   PRK05681
- BioCyc:   BSUB:BSU16190-MONOMER
- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299
- TIGRFAMs:   TIGR01395

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod

EC number: NA

Molecular weight: Translated: 16258; Mature: 16127

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHH
SSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVD
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHH
LVSSTRSYEANVTAMNATKGMLMKALEIGK
HHHCCCCCCCEEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure 
TAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESF
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHH
SSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVD
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHH
LVSSTRSYEANVTAMNATKGMLMKALEIGK
HHHCCCCCCCEEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377