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The map label for this gene is dprA

Identifier: 16078674

GI number: 16078674

Start: 1682580

End: 1683473

Strand: Direct

Name: dprA

Synonym: BSU16110

Alternate gene names: 16078674

Gene position: 1682580-1683473 (Clockwise)

Preceding gene: 16078673

Following gene: 16078675

Centisome position: 39.91

GC content: 44.41

Gene sequence:

>894_bases
TTGGATCAGGCCGCTGTCTGCCTAACGATTTGCAGAATCAATCAATTATTATCCCCATCCCTTCTATTAAAATGGTGGAA
AGCCGATCCGTCTATGTCGCTGACATCACCCGTGTTACAAACGGTTACTCGTGATCAAATAAAAGCAGCTGCATTAAAAA
ACGAAATAGAACAATTTTATCCAAAGCTCCCGCGTGTACTTGCTGCTTATCGTGAGCAAGGCATTAACACCATCCCTATT
TCTTCAAAGCAATATCCTTTCTGGCTTAAAAGCATTTATGATCCCCCTGCCGTACTGTTTGCAAAAGGTGATATGACTCT
TCTTTCGAAAGGGAGAAAAATTGGAATTGTAGGCACAAGAAATCCAACAGCTTATGGGAAACAAGTTGTCAATCATCTTA
CAAAAGAGATCTGTCGTAAAGGTTGGGTGATTGTCAGCGGACTGGCGTCTGGGATAGACGGAATGTCCCATGCTGCAAGT
ATTAAGGCGAAGGGGCGGACAATTGGCGTCATTGCAGGCGGATTTCAACACATTTATCCCCGAGAAAACCTTCAGTTAGC
AGATCACATGGCTAAACACCATATCCTGCTGTCAGAGCACCCACCTGAAACTAAACCCCAAAAATGGCATTTCCCTATGA
GAAACCGTATTATCAGCGGACTAAGTGAAGGCGTTATTGTCGTTCAGGGCAAAGAAAAAAGCGGTTCGCTGATTACTGCC
TATCAAGCATTGGAACAAGGGAGAGAGGTATTTGCCGTACCCGGTTCATTGTTTGACCCTTACGCCGGAGGTCCTATAAA
ACTGATCCAGCAGGGGGCTAAAGCCATATGGTCAGCAGAGGATATTTTCGAGGAACTTCCTGAGAGAAACGTTCAATATA
CGGAACCCTTTTGA

Upstream 100 bases:

>100_bases
GAAAGAGAAGAACTTGTTCGAAACTTGTAAAACGCATTAATAAAAAAGGGACAGCCGTCAAGGCTGTTCCTGCTTTTTCT
AACAAAAGGAGGTCAATCTA

Downstream 100 bases:

>100_bases
ATTATCGTTTGACAAACGGTATTGTAATATTTAATAATAGTGAGGATTTAAAGTTGCATATTGTTTTCTATTTAATTAAT
GACGTTCATGATAAAGAATG

Product: DNA processing Smf single strand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MDQAAVCLTICRINQLLSPSLLLKWWKADPSMSLTSPVLQTVTRDQIKAAALKNEIEQFYPKLPRVLAAYREQGINTIPI
SSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGIVGTRNPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAAS
IKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF

Sequences:

>Translated_297_residues
MDQAAVCLTICRINQLLSPSLLLKWWKADPSMSLTSPVLQTVTRDQIKAAALKNEIEQFYPKLPRVLAAYREQGINTIPI
SSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGIVGTRNPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAAS
IKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF
>Mature_297_residues
MDQAAVCLTICRINQLLSPSLLLKWWKADPSMSLTSPVLQTVTRDQIKAAALKNEIEQFYPKLPRVLAAYREQGINTIPI
SSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGIVGTRNPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAAS
IKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family

Homologues:

Organism=Escherichia coli, GI48994932, Length=212, Percent_Identity=41.5094339622642, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMF_BACSU (P39813)

Other databases:

- EMBL:   AJ000975
- EMBL:   AL009126
- EMBL:   L27797
- PIR:   H69708
- RefSeq:   NP_389493.1
- ProteinModelPortal:   P39813
- SMR:   P39813
- IntAct:   P39813
- EnsemblBacteria:   EBBACT00000001718
- GeneID:   940135
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16110
- NMPDR:   fig|224308.1.peg.1613
- GenoList:   BSU16110
- GeneTree:   EBGT00050000002700
- HOGENOM:   HBG758551
- OMA:   QGNIELL
- PhylomeDB:   P39813
- ProtClustDB:   CLSK887303
- BioCyc:   BSUB:BSU16110-MONOMER
- InterPro:   IPR003488
- TIGRFAMs:   TIGR00732

Pfam domain/function: PF02481 DNA_processg_A

EC number: NA

Molecular weight: Translated: 32936; Mature: 32936

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAAVCLTICRINQLLSPSLLLKWWKADPSMSLTSPVLQTVTRDQIKAAALKNEIEQFY
CCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKLPRVLAAYREQGINTIPISSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGIVGTR
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHCCCEEEEEECC
NPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAASIKAKGRTIGVIAGGFQHIYP
CCHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHEECCCEEEEEECCHHHCCC
RENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
CCCCHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHH
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF
HHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDQAAVCLTICRINQLLSPSLLLKWWKADPSMSLTSPVLQTVTRDQIKAAALKNEIEQFY
CCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKLPRVLAAYREQGINTIPISSKQYPFWLKSIYDPPAVLFAKGDMTLLSKGRKIGIVGTR
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHCCCEEEEEECC
NPTAYGKQVVNHLTKEICRKGWVIVSGLASGIDGMSHAASIKAKGRTIGVIAGGFQHIYP
CCHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHEECCCEEEEEECCHHHCCC
RENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
CCCCHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHH
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF
HHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377