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The map label for this gene is ftsY

Identifier: 16078658

GI number: 16078658

Start: 1670140

End: 1671129

Strand: Direct

Name: ftsY

Synonym: BSU15950

Alternate gene names: 16078658

Gene position: 1670140-1671129 (Clockwise)

Preceding gene: 255767364

Following gene: 16078660

Centisome position: 39.62

GC content: 42.93

Gene sequence:

>990_bases
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTTGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Upstream 100 bases:

>100_bases
TATGGCGTAACCATGCAGGAATCCGGTGTTTCCAAGGTAATTTCAGTTAAGCTGGAAGAAACAAAAGAATTCGTTCAGTA
ACGAGGAAAGAGGTTAAAAG

Downstream 100 bases:

>100_bases
GAAAAAGGCCCCAACATCTTGGGGCCTTTTTCTTTTTTATCTTCTTACTTGATAGGCGAAATGATAAAGGCTGTTATCAG
TGGATACCAGTCTTGACTCA

Product: signal recognition particle (docking protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Sequences:

>Translated_329_residues
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD
>Mature_328_residues
SFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEVK
RRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRA
GAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPHE
VLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLFS
DLVEKADD

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family

Homologues:

Organism=Homo sapiens, GI4507215, Length=274, Percent_Identity=30.2919708029197, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI226371618, Length=232, Percent_Identity=32.3275862068966, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI23308697, Length=304, Percent_Identity=28.6184210526316, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI295424842, Length=304, Percent_Identity=28.6184210526316, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1789874, Length=314, Percent_Identity=50, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI1788963, Length=279, Percent_Identity=33.6917562724014, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=273, Percent_Identity=30.7692307692308, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=224, Percent_Identity=34.375, Blast_Score=109, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=250, Percent_Identity=31.2, Blast_Score=140, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6320498, Length=229, Percent_Identity=29.2576419213974, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17647949, Length=280, Percent_Identity=29.6428571428571, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24641198, Length=302, Percent_Identity=27.4834437086093, Blast_Score=95, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FTSY_BACSU (P51835)

Other databases:

- EMBL:   D49781
- EMBL:   D64116
- EMBL:   AL009126
- PIR:   JC4093
- RefSeq:   NP_389477.1
- ProteinModelPortal:   P51835
- SMR:   P51835
- EnsemblBacteria:   EBBACT00000001023
- GeneID:   936921
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU15950
- NMPDR:   fig|224308.1.peg.1597
- GenoList:   BSU15950
- GeneTree:   EBGT00050000001995
- HOGENOM:   HBG562580
- OMA:   QDPKEVQ
- PhylomeDB:   P51835
- ProtClustDB:   PRK10416
- BioCyc:   BSUB:BSU15950-MONOMER
- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822
- Gene3D:   G3DSA:1.20.120.140
- SMART:   SM00382
- SMART:   SM00962
- SMART:   SM00963
- TIGRFAMs:   TIGR00064

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N; SSF47364 SRP54

EC number: NA

Molecular weight: Translated: 36343; Mature: 36212

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SADVGFTTVMELIDELKKEVKRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRL
HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCE
NVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPVIK
EEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHH
QTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
HCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGL
HEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEC
GEKVDDLQEFDPESYVYGLFSDLVEKADD
CCHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SADVGFTTVMELIDELKKEVKRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRL
HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCE
NVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPVIK
EEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHH
QTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
HCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGL
HEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEC
GEKVDDLQEFDPESYVYGLFSDLVEKADD
CCHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983