Click here to switch to the map view.

The map label for this gene is ylbA

Identifier: 16078558

GI number: 16078558

Start: 1565347

End: 1565709

Strand: Reverse

Name: ylbA

Synonym: BSU14940

Alternate gene names: 16078558

Gene position: 1565709-1565347 (Counterclockwise)

Preceding gene: 16078567

Following gene: 16078551

Centisome position: 37.14

GC content: 46.28

Gene sequence:

>363_bases
GTGTTGAAGTTTACTGAAAGCGGACTTGAAGGGGTTAAGGCTGAGCTCAGCTGGCTAGACGACTTAATGGAAAGCAAAGG
TCTTATCAGAGCGGGTCAATGGGATTACGAGAGAGTCACCTATGACAAGAAGTTTTCGACGATTGAGGGTACGTTTTACC
TGCGGATACAAGGTATTGCGGCAGAAGGCGATGTCGGAAGCGGGCGCGCCGTGATTCAATTAATGTCCCCTCTCCTAGGA
AAGCATTACTACCCTCATGGAGTAGAATATGGAGAAACGGAAGAGTTTCCCGTACAGGTTGTGACAAAAAGCAAGGCACT
GATTCAGGACATAGCCAACATGTTAAAAACAGTTCAAATGTAA

Upstream 100 bases:

>100_bases
ATTTAATTTTTGCATACTTTCAAAAGAAGAAGATTCATTGAAAGTTTAACGCTTTCATACTATGATTGTCAGGAAAGGTA
ATTTTTATAAGGAGGGGTCA

Downstream 100 bases:

>100_bases
CGAAAAGGTACAGCATATTTCGCTGTACCTTTTATGATATCGTCTGCTGAATATACGGCGGCTCCTCCTGCCCGTCCTTT
TCCCTTTCTTTCTTCACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLKFTESGLEGVKAELSWLDDLMESKGLIRAGQWDYERVTYDKKFSTIEGTFYLRIQGIAAEGDVGSGRAVIQLMSPLLG
KHYYPHGVEYGETEEFPVQVVTKSKALIQDIANMLKTVQM

Sequences:

>Translated_120_residues
MLKFTESGLEGVKAELSWLDDLMESKGLIRAGQWDYERVTYDKKFSTIEGTFYLRIQGIAAEGDVGSGRAVIQLMSPLLG
KHYYPHGVEYGETEEFPVQVVTKSKALIQDIANMLKTVQM
>Mature_120_residues
MLKFTESGLEGVKAELSWLDDLMESKGLIRAGQWDYERVTYDKKFSTIEGTFYLRIQGIAAEGDVGSGRAVIQLMSPLLG
KHYYPHGVEYGETEEFPVQVVTKSKALIQDIANMLKTVQM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YLBA_BACSU (O34743)

Other databases:

- EMBL:   Z98682
- EMBL:   AL009126
- PIR:   F69873
- RefSeq:   NP_389377.1
- ProteinModelPortal:   O34743
- SMR:   O34743
- EnsemblBacteria:   EBBACT00000003821
- GeneID:   939858
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14940
- NMPDR:   fig|224308.1.peg.1496
- GenoList:   BSU14940
- GeneTree:   EBGT00050000002698
- HOGENOM:   HBG313630
- OMA:   GVEYGDD
- ProtClustDB:   CLSK2460917
- BioCyc:   BSUB:BSU14940-MONOMER
- InterPro:   IPR014967

Pfam domain/function: PF08868 YugN

EC number: NA

Molecular weight: Translated: 13494; Mature: 13494

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKFTESGLEGVKAELSWLDDLMESKGLIRAGQWDYERVTYDKKFSTIEGTFYLRIQGIA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHEECCCCCEECCEEEEEEEEEE
AEGDVGSGRAVIQLMSPLLGKHYYPHGVEYGETEEFPVQVVTKSKALIQDIANMLKTVQM
ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKFTESGLEGVKAELSWLDDLMESKGLIRAGQWDYERVTYDKKFSTIEGTFYLRIQGIA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHEECCCCCEECCEEEEEEEEEE
AEGDVGSGRAVIQLMSPLLGKHYYPHGVEYGETEEFPVQVVTKSKALIQDIANMLKTVQM
ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377