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The map label for this gene is ctaF

Identifier: 16078556

GI number: 16078556

Start: 1564063

End: 1564395

Strand: Direct

Name: ctaF

Synonym: BSU14920

Alternate gene names: 16078556

Gene position: 1564063-1564395 (Clockwise)

Preceding gene: 16078555

Following gene: 16078557

Centisome position: 37.1

GC content: 41.44

Gene sequence:

>333_bases
ATGGTCGATAAAAAAAGCAGAGGGCATATCAATAGCGACCTTGAATTTAAGAAAAAAAAGCATGCCCGGGAGATGAAATA
TCAAGTCCTGTCTTTTGGTTTAATGATCGGTCTTACGATTGTTGCATTTCTGACTGTGGCCACGGACGGTGTCGGCAGCT
GGTTTACGATTCCTTTCATTATTTTGCTAGCTGCAATTCAAGTCATTTTTCAGCTGTATTATTTCATGCATATGAATCAG
AAAGGGCATGAGGCGCCGGCACTGTTTTTGTATTCAGGGGTGTTTGTCGCGTTTATCACTGTGCTTGCGTTTGTGACAAT
TATATGGTGGTAA

Upstream 100 bases:

>100_bases
CGCCTAAGTTTTACGTTGCCAGCCTTTATTGGCACTTTATTGATGTCGTGTGGGTCTTCATCTTTACCGTTGTATATTTA
ATGGGGATGGTGGGATAAAC

Downstream 100 bases:

>100_bases
TTTGAACAGCCGCCGGAGGTGAAGAAATGAATCAGTTGGAGATATTTGGGTTTCGCGCGATGTGGAGCCCTTATCTTTTT
TGTATCCTGTTAGGCATTAC

Product: cytochrome caa3 oxidase subunit IV

Products: NA

Alternate protein names: Caa-3605 subunit 4B; Cytochrome aa3 subunit 4B; Cytochrome c oxidase polypeptide IVB

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVDKKSRGHINSDLEFKKKKHAREMKYQVLSFGLMIGLTIVAFLTVATDGVGSWFTIPFIILLAAIQVIFQLYYFMHMNQ
KGHEAPALFLYSGVFVAFITVLAFVTIIWW

Sequences:

>Translated_110_residues
MVDKKSRGHINSDLEFKKKKHAREMKYQVLSFGLMIGLTIVAFLTVATDGVGSWFTIPFIILLAAIQVIFQLYYFMHMNQ
KGHEAPALFLYSGVFVAFITVLAFVTIIWW
>Mature_110_residues
MVDKKSRGHINSDLEFKKKKHAREMKYQVLSFGLMIGLTIVAFLTVATDGVGSWFTIPFIILLAAIQVIFQLYYFMHMNQ
KGHEAPALFLYSGVFVAFITVLAFVTIIWW

Specific function: Unknown

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX4_BACSU (P24013)

Other databases:

- EMBL:   X54140
- EMBL:   Z98682
- EMBL:   AL009126
- PIR:   G69609
- RefSeq:   NP_389375.1
- ProteinModelPortal:   P24013
- EnsemblBacteria:   EBBACT00000003016
- GeneID:   936259
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14920
- NMPDR:   fig|224308.1.peg.1494
- GenoList:   BSU14920
- GeneTree:   EBGT00050000002609
- HOGENOM:   HBG533943
- OMA:   PKVDLVY
- ProtClustDB:   CLSK873364
- BioCyc:   BSUB:BSU14920-MONOMER
- BRENDA:   1.9.3.1
- InterPro:   IPR014257
- InterPro:   IPR005171
- TIGRFAMs:   TIGR02908

Pfam domain/function: PF03626 COX4_pro

EC number: =1.9.3.1

Molecular weight: Translated: 12620; Mature: 12620

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb8a8d60)-; HASH(0xcb4122c)-; HASH(0xecbe328)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKKSRGHINSDLEFKKKKHAREMKYQVLSFGLMIGLTIVAFLTVATDGVGSWFTIPFI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILLAAIQVIFQLYYFMHMNQKGHEAPALFLYSGVFVAFITVLAFVTIIWW
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MVDKKSRGHINSDLEFKKKKHAREMKYQVLSFGLMIGLTIVAFLTVATDGVGSWFTIPFI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ILLAAIQVIFQLYYFMHMNQKGHEAPALFLYSGVFVAFITVLAFVTIIWW
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1847686; 9384377