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The map label for this gene is yknW

Identifier: 16078498

GI number: 16078498

Start: 1503582

End: 1504277

Strand: Direct

Name: yknW

Synonym: BSU14340

Alternate gene names: 16078498

Gene position: 1503582-1504277 (Clockwise)

Preceding gene: 16078497

Following gene: 16078499

Centisome position: 35.67

GC content: 42.96

Gene sequence:

>696_bases
ATGGAAACGAATGTAGAAAAAAACAGCGGAACGGCGACTGAAAAGCCTTCACTTTTCGGAGTAATCACAAGTCCGTCCGT
TCAATTTGAAAGAATAAGAGAAAGGCCGGCTGTATGGGGACCGCTTTTGATTGTTGCAGCAATTATCATCGTCGGTGCCG
TGCTGCAATCACTCGGTACGGATTATAGTGAGCTTTTGAAAAGCCAGGATACGCAAGGGCTATCTGCTGAACAAATGGAA
ACTGTCGCAACAATAACCAAATTTGGCGGAATGGCAGGCGCTATTATCGGCGGTATCGCAGCATTATTTATTGCCCCTCT
TATTTATTGGCTCTGTGTAAAAGTATCAGGCGGTGTTACGACATATAAAAAAATGCTTTCTCTCAGTCTGTTTGTCTCTT
TGATTAGCAGTCTCGGATTATTGGTTAATGGAATCGTTGCTTTTACGACTGACGTGAATCCTCTTTACAGCACGACGTCA
CTCGCAGGGATTATCCCATCTGACGGGGCTCTCGCCAGTGTGTTAAATACCTTTGAAATTTTCAGCATCTGGAGCTTTGT
ATTATTAGCAATCGGACTTCACAAAACGGGAGGCATCTCAAAAAAAGCCGGGTGGATTTCAGCAATCATTCTATTCGGAA
TTTTAGTTGTATTTTCGCTTTTTTCAGGTTTAATCAATTCTGTGGCGGGTGCATAA

Upstream 100 bases:

>100_bases
CCTTCAATATTGAAGGTTTTTGGAAATTTATTAGAAAAACATGAAACTTTTTGATATCCTTCCCGTACTATTTGTTAGAT
ATTCTCAAGGAGGTTTTGAA

Downstream 100 bases:

>100_bases
GCTCATGAAAAAAGTCTGGATCGGAATTGGAATCGCAGTTATAGTCGCTCTTTTTGTTGGAATCAATATATACCGGTCTG
CCGCTCCGACAAGCGGCAGC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
METNVEKNSGTATEKPSLFGVITSPSVQFERIRERPAVWGPLLIVAAIIIVGAVLQSLGTDYSELLKSQDTQGLSAEQME
TVATITKFGGMAGAIIGGIAALFIAPLIYWLCVKVSGGVTTYKKMLSLSLFVSLISSLGLLVNGIVAFTTDVNPLYSTTS
LAGIIPSDGALASVLNTFEIFSIWSFVLLAIGLHKTGGISKKAGWISAIILFGILVVFSLFSGLINSVAGA

Sequences:

>Translated_231_residues
METNVEKNSGTATEKPSLFGVITSPSVQFERIRERPAVWGPLLIVAAIIIVGAVLQSLGTDYSELLKSQDTQGLSAEQME
TVATITKFGGMAGAIIGGIAALFIAPLIYWLCVKVSGGVTTYKKMLSLSLFVSLISSLGLLVNGIVAFTTDVNPLYSTTS
LAGIIPSDGALASVLNTFEIFSIWSFVLLAIGLHKTGGISKKAGWISAIILFGILVVFSLFSGLINSVAGA
>Mature_231_residues
METNVEKNSGTATEKPSLFGVITSPSVQFERIRERPAVWGPLLIVAAIIIVGAVLQSLGTDYSELLKSQDTQGLSAEQME
TVATITKFGGMAGAIIGGIAALFIAPLIYWLCVKVSGGVTTYKKMLSLSLFVSLISSLGLLVNGIVAFTTDVNPLYSTTS
LAGIIPSDGALASVLNTFEIFSIWSFVLLAIGLHKTGGISKKAGWISAIILFGILVVFSLFSGLINSVAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKNW_BACSU (O31709)

Other databases:

- EMBL:   AF012285
- EMBL:   AL009126
- PIR:   B69858
- RefSeq:   NP_389317.1
- ProteinModelPortal:   O31709
- EnsemblBacteria:   EBBACT00000000277
- GeneID:   938771
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14340
- NMPDR:   fig|224308.1.peg.1436
- GenoList:   BSU14340
- GeneTree:   EBGT00050000001416
- HOGENOM:   HBG340369
- OMA:   GNDTSYK
- ProtClustDB:   CLSK887229
- BioCyc:   BSUB:BSU14340-MONOMER
- InterPro:   IPR006977

Pfam domain/function: PF04893 Yip1

EC number: NA

Molecular weight: Translated: 24176; Mature: 24176

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe6dfd04)-; HASH(0xd670b80)-; HASH(0xeceb0a8)-; HASH(0xd519654)-; HASH(0xde806f4)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNVEKNSGTATEKPSLFGVITSPSVQFERIRERPAVWGPLLIVAAIIIVGAVLQSLGT
CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
DYSELLKSQDTQGLSAEQMETVATITKFGGMAGAIIGGIAALFIAPLIYWLCVKVSGGVT
CHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TYKKMLSLSLFVSLISSLGLLVNGIVAFTTDVNPLYSTTSLAGIIPSDGALASVLNTFEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
FSIWSFVLLAIGLHKTGGISKKAGWISAIILFGILVVFSLFSGLINSVAGA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
METNVEKNSGTATEKPSLFGVITSPSVQFERIRERPAVWGPLLIVAAIIIVGAVLQSLGT
CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
DYSELLKSQDTQGLSAEQMETVATITKFGGMAGAIIGGIAALFIAPLIYWLCVKVSGGVT
CHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TYKKMLSLSLFVSLISSLGLLVNGIVAFTTDVNPLYSTTSLAGIIPSDGALASVLNTFEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
FSIWSFVLLAIGLHKTGGISKKAGWISAIILFGILVVFSLFSGLINSVAGA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377